Tunneling Nanotube Research Center

Research Output 2001 2020

  • 387 Citations
  • 9 h-Index
  • 29 Article
  • 4 Review article
  • 3 Comment/debate
2020

Transmission and regulation of biochemical stimulus via a nanoshell directly adsorbed on the cell membrane to enhance chondrogenic differentiation of mesenchymal stem cell

Han, U., Hwang, J. H., Lee, J. M., Kim, H., Jung, H. S., Hong, J. H. & Hong, J., 2020 Jan 1, In : Biotechnology and Bioengineering. 117, 1, p. 184-193 10 p.

Research output: Contribution to journalArticle

Nanoshells
Cell membranes
Stem cells
Mesenchymal Stromal Cells
Chondroitin Sulfates
2019

ABCB7 simultaneously regulates apoptotic and non-apoptotic cell death by modulating mitochondrial ROS and HIF1α-driven NFκB signaling

Kim, J. Y., Kim, J. K. & Kim, H., 2019 Jan 1, (Accepted/In press) In : Oncogene.

Research output: Contribution to journalArticle

Cell Death
Iron
Homeostasis
Hypoxia-Inducible Factor 1
Leucine Zippers
1 Citation (Scopus)
Open Access
Histone Deacetylase 1
Acetylation
Ionizing Radiation
Down-Regulation
Endothelial Cells

A novel long noncoding RNA Linc-ASEN represses cellular senescence through multileveled reduction of p21 expression

Lee, H. C., Kang, D., Han, N., Lee, Y., Hwang, H. J., Lee, S. B., You, J. S., Min, B. S., Park, H. J., Ko, Y. G., Gorospe, M. & Lee, J. S., 2019 Jan 1, (Accepted/In press) In : Cell Death and Differentiation.

Research output: Contribution to journalArticle

Long Noncoding RNA
Cell Aging
RNA Stability
Polycomb Repressive Complex 1
Histone Code

CONFIGURE: A pipeline for identifying context specific regulatory modules from gene expression data and its application to breast cancer

Park, S., Hwang, D., Yeo, Y. S., Kim, H. & Kang, J., 2019 Jul 11, In : BMC Medical Genomics. 12, 97.

Research output: Contribution to journalArticle

Open Access
Regulator Genes
Breast Neoplasms
Gene Expression
Genes
RNA
4 Citations (Scopus)

DLK regulates a distinctive transcriptional regeneration program after peripheral nerve injury

Shin, J. E., Ha, H., Kim, Y. K., Cho, Y. & DiAntonio, A., 2019 Jul 1, In : Neurobiology of Disease. 127, p. 178-192 15 p.

Research output: Contribution to journalArticle

Leucine Zippers
Peripheral Nerve Injuries
Regeneration
Phosphotransferases
Wounds and Injuries

Essential role of protein arginine methyltransferase 1 in pancreas development by regulating protein stability of neurogenin 3

Lee, K., Kim, H., Lee, J., Oh, C. M., Song, H., Kim, H., Koo, S. H., Lee, J., Lim, A. & Kim, H., 2019 Jan 1, In : Diabetes and Metabolism Journal. 43, 5, p. 649-658 10 p.

Research output: Contribution to journalArticle

Open Access
Protein-Arginine N-Methyltransferases
Protein Stability
Pancreas
Stem Cells
Proteolysis

MiR-195 and miR-497 suppress tumorigenesis in lung cancer by inhibiting SMURF2-induced TGF-β receptor I ubiquitination

Chae, D. K., Park, J., Cho, M., Ban, E., Jang, M., Yoo, Y. S., Kim, E. E. K., Baik, J. H. & Song, E. J., 2019 Dec 1, In : Molecular Oncology. 13, 12, p. 2663-2678 16 p.

Research output: Contribution to journalArticle

Open Access
Growth Factor Receptors
Ubiquitination
Transforming Growth Factors
Lung Neoplasms
Carcinogenesis

Mycoplasma exploits mammalian tunneling nanotubes for cell-to-cell dissemination

Kim, B. W., Lee, J. S. & Ko, Y-G., 2019 Jan 1, In : BMB reports. 52, 8, p. 490-495 6 p.

Research output: Contribution to journalArticle

Open Access
Mycoplasma hyorhinis
Nanotubes
Mycoplasma
Mycoplasma Infections
Coculture Techniques

Pan-HDAC inhibitors promote tau aggregation by increasing the level of acetylated TAU

Jeong, H., Shin, S., Lee, J. S., Lee, S. H., Baik, J. H., Lim, S. & Kim, Y. K., 2019 Sep 1, In : International journal of molecular sciences. 20, 17, 4283.

Research output: Contribution to journalArticle

Open Access
Histone Deacetylase Inhibitors
inhibitors
Alzheimer Disease
Agglomeration
acetylation

Salt-inducible kinase 1 regulates bone anabolism via the CRTC1–CREB–Id1 axis

Kim, M. K., Kwon, J. O., Song, M. K., Kim, B., Kim, H., Lee, Z. H., Koo, S. H. & Kim, H. H., 2019 Nov 1, In : Cell Death and Disease. 10, 11, 826.

Research output: Contribution to journalArticle

Open Access
Phosphotransferases
Salts
Bone and Bones
Osteoblasts
Osteogenesis
3 Citations (Scopus)

TAZ stimulates liver regeneration through interleukin-6-induced hepatocyte proliferation and inhibition of cell death after liver injury

Kim, A. R., Park, J. I., Oh, H. T., Kim, K. M., Hwang, J. H., Jeong, M. G., Kim, E. H., Hwang, E. S. & Hong, J-H., 2019 May 1, In : FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 33, 5, p. 5914-5923 10 p.

Research output: Contribution to journalArticle

Liver Regeneration
Cell death
Liver
Hepatocytes
Interleukin-6

The function of PLCγ1 in developing mouse mDA system

Kang, D. S., Kim, I. S., Baik, J-H., Kim, D., Cocco, L. & Suh, P. G., 2019 Jan 1, (Accepted/In press) In : Advances in Biological Regulation. 100654.

Research output: Contribution to journalReview article

Phospholipase C gamma
Nervous System
Cell Shape
Transducers
Cell Movement
2 Citations (Scopus)

Three-Dimensional Culture of Salivary Gland Stem Cell in Orthotropic Decellularized Extracellular Matrix Hydrogels

Shin, K., Koo, K. H., Jeong, J., Park, S. J., Choi, D. J., Ko, Y. G. & Kwon, H., 2019 Oct, In : Tissue Engineering - Part A. 25, 19-20, p. 1396-1403 8 p.

Research output: Contribution to journalArticle

Hydrogels
Hydrogel
Salivary Glands
Stem cells
Cell culture
2018
1 Citation (Scopus)

Clipick: A sensitive peak caller for expression-based deconvolution of HITS-CLIP signals

Park, S., Ahn, S. H., Cho, E. S., Cho, Y. K., Jang, E. S. & Chi, S. W., 2018 Jan 1, In : Nucleic acids research. 46, 21, p. 11153-11168 16 p.

Research output: Contribution to journalArticle

Open Access
Boidae
High-Throughput Nucleotide Sequencing
Signal-To-Noise Ratio
MicroRNAs
Immunoprecipitation
1 Citation (Scopus)

Comparative analysis of the transcriptome of injured nerve segments reveals spatiotemporal responses to neural damage in mice

Shin, J. E., Ha, H., Cho, E. H., Kim, Y. K. & Cho, Y., 2018 May 1, In : Journal of Comparative Neurology. 526, 7, p. 1195-1208 14 p.

Research output: Contribution to journalArticle

Gene Expression Profiling
Wounds and Injuries
Biological Phenomena
Genes
Transcriptome

Erratum: Publisher Correction: Role of Dopamine D2 Receptor in Stress-Induced Myelin Loss (Scientific reports (2017) 7 1 (11654))

Choi, M. H., Na, J. E., Yoon, Y. R., Lee, H. J., Yoon, S., Rhyu, I. J. & Baik, J-H., 2018 Apr 11, In : Scientific reports. 8, 1, 1 p.

Research output: Contribution to journalComment/debate

Open Access
Dopamine D2 Receptors
Myelin Sheath
17 Citations (Scopus)

Evaluation and control of miRNA-like off-target repression for RNA interference

Seok, H., Lee, H., Jang, E. S. & Chi, S. W., 2018 Mar 1, In : Cellular and Molecular Life Sciences. 75, 5, p. 797-814 18 p.

Research output: Contribution to journalReview article

RNA Interference
MicroRNAs
Small Interfering RNA
RNA-Induced Silencing Complex
Genome
5 Citations (Scopus)

Nootropic nanocomplex with enhanced blood-brain barrier permeability for treatment of traumatic brain injury-associated neurodegeneration

Park, J., Choi, E., Shin, S., Lim, S., Kim, D., Baek, S., Lee, K. P., Lee, J. J., Lee, B. H., Kim, B., Jeong, K., Baik, J-H., Kim, Y. K. & Kim, S., 2018 Aug 28, In : Journal of Controlled Release. 284, p. 152-159 8 p.

Research output: Contribution to journalArticle

Nootropic Agents
Methylene Blue
Blood-Brain Barrier
Permeability
Poloxamer
1 Citation (Scopus)

SiAbasic: A comprehensive database for potent siRNA-6Ø sequences without off-target effects

Park, J., Ahn, S. H., Cho, K. M., Gu, D., Jang, E. S. & Chi, S. W., 2018 Jan 1, In : Database. 2018, 2018

Research output: Contribution to journalArticle

Open Access
small interfering RNA
RNA
Small Interfering RNA
Databases
MicroRNAs
2017
1 Citation (Scopus)

Disruption of TACE-filamin interaction can inhibit TACE-mediated ectodomain shedding

Cho, Y., Park, D. & Kim, C., 2017 Aug 26, In : Biochemical and Biophysical Research Communications. 490, 3, p. 997-1003 7 p.

Research output: Contribution to journalArticle

Filamins
Tumor Necrosis Factor-alpha
Enzymes
Tetradecanoylphorbol Acetate
Membrane Proteins
8 Citations (Scopus)

Epigenetic regulation of axon regeneration after neural injury

Shin, J. E. & Cho, Y., 2017 Jan 1, In : Molecules and cells. 40, 1, p. 10-16 7 p.

Research output: Contribution to journalReview article

Open Access
Epigenomics
Axons
Regeneration
Wounds and Injuries
Peripheral Nervous System
2016
55 Citations (Scopus)

MicroRNA target recognition: Insights from transcriptome-wide non-canonical interactions

Seok, H., Ham, J., Jang, E. S. & Chi, S. W., 2016 May 1, In : Molecules and cells. 39, 5, p. 375-381 7 p.

Research output: Contribution to journalReview article

Open Access
MicroRNAs
Transcriptome
Seeds
RNA-Induced Silencing Complex
Small Untranslated RNA
6 Citations (Scopus)

Rationally designed siRNAs without miRNA-like off-target repression

Seok, H., Jang, E. S. & Chi, S. W., 2016 Mar 1, In : BMB reports. 49, 3, p. 135-136 2 p.

Research output: Contribution to journalArticle

Open Access
MicroRNAs
Small Interfering RNA
Nucleation
Substitution reactions
RNA-Induced Silencing Complex
2015
14 Citations (Scopus)

Abasic pivot substitution harnesses target specificity of RNA interference

Lee, H. S., Seok, H., Lee, D. H., Ham, J., Lee, W., Youm, E. M., Yoo, J. S., Lee, Y. S., Jang, E. S. & Chi, S. W., 2015 Dec 18, In : Nature communications. 6, 10154.

Research output: Contribution to journalArticle

Open Access
pivots
harnesses
RNA Interference
MicroRNAs
Substitution reactions
53 Citations (Scopus)

Activating Injury-Responsive Genes with Hypoxia Enhances Axon Regeneration through Neuronal HIF-1α

Cho, Y., Shin, J. E., Ewan, E. E., Oh, Y. M., Pita-Thomas, W. & Cavalli, V., 2015 Nov 18, In : Neuron. 88, 4, p. 720-734 15 p.

Research output: Contribution to journalArticle

Open Access
Hypoxia-Inducible Factor 1
Axons
Regeneration
Wounds and Injuries
Genes
5 Citations (Scopus)

Erratum: Injury-induced HDAC5 nuclear export is essential for axon regeneration (Cell (2013) 155 (894-908)

Cho, Y., Sloutsky, R., Naegle, K. M. & Cavalli, V., 2015 Apr 23, In : Cell. 161, 3, 1 p.

Research output: Contribution to journalComment/debate

Open Access
Axons
3 Citations (Scopus)

Erratum: Human adipose tissue-derived mesenchymal stem cells target brain tumor-initiating cells (PLoS ONE 10(7): (e0132877)) doi:10.1371/journal.pone.0132877

Choi, S. A., Lee, J. Y., Kwon, S. E., Wang, K. C., Phi, J. H., Choi, J. W., Jin, X., Lim, J. Y., Kim, H. & Kim, S. K., 2015 Jul 28, In : PLoS One. 10, 7, 132877.

Research output: Contribution to journalArticle

Neoplastic Stem Cells
Mesenchymal Stromal Cells
Brain Neoplasms
adipose tissue
stem cells
2013
4 Citations (Scopus)

Errata to FMRP Regulates Neurotransmitter Release and Synaptic Information Transmission by Modulating Action Potential Duration via BK Channels [Neuron 77, (2013) 696-711]

Deng, P. Y., Rotman, Z., Blundon, J. A., Cho, Y., Cui, J., Cavalli, V., Zakharenko, S. S. & Klyachko, V. A., 2013 Apr 10, In : Neuron. 78, 1, 1 p.

Research output: Contribution to journalComment/debate

Open Access
Large-Conductance Calcium-Activated Potassium Channels
Synaptic Transmission
Action Potentials
Neurotransmitter Agents
Neurons
34 Citations (Scopus)

Inverse agonist of nuclear receptor ERRγ mediates antidiabetic effect through inhibition of hepatic gluconeogenesis

Kim, D. K., Gang, G. T., Ryu, D., Koh, M., Kim, Y. N., Kim, S. S., Park, J., Kim, Y. H., Sim, T., Lee, I. K., Choi, C. S., Park, S. B., Lee, C. H., Koo, S-H. & Choi, H. S., 2013 Sep 1, In : Diabetes. 62, 9, p. 3093-3102 10 p.

Research output: Contribution to journalArticle

Gluconeogenesis
Cytoplasmic and Nuclear Receptors
Hypoglycemic Agents
Estrogen Receptors
Type 2 Diabetes Mellitus
2009
10 Citations (Scopus)
2008
11 Citations (Scopus)

Kinesin superfamily-associated protein 3 is preferentially expressed in glutamatergic neurons and contributes to the excitatory control of female puberty

Choi, J., Chang, M. H., Eun, J. C., Choon, S. J., Jeong, W. P., Baik, J-H., Park, J-Y., Costa, M. E., Ojeda, S. R. & Byung, J. L., 2008 Dec 1, In : Endocrinology. 149, 12, p. 6146-6156 11 p.

Research output: Contribution to journalArticle

Kinesin
Puberty
Neurons
Proteins
Gonadotropin-Releasing Hormone
2007

Erratum: Bcl2L12 inhibits post-mitochondrial apoptosis signaling in glioblastoma (Ecography (2007) 21 (98-111))

Stegh, A. H., Kim, H., Bachoo, R. M., Forloney, K. L., Zhang, J., Schulze, H., Park, K., Hannon, G. J., Yuan, J., Louis, D. N., DePinho, R. A. & Chin, L., 2007 Feb 15, In : Genes and Development. 21, 4

Research output: Contribution to journalArticle

Glioblastoma
Apoptosis
2004

Erratum: GC-1 promotes insulin resistance in liver through PPAR-α-dependent induction of TRB-3 (Nature Medicine (2004) 10 (530-534))

Koo, S. H., Satoh, H., Herzig, S., Lee, C. H., Hedrick, S., Kulkarni, R., Evans, R. M., Olefsky, J. & Montminy, M., 2004 Jul 1, In : Nature Medicine. 10, 7

Research output: Contribution to journalArticle

PPAR alpha
Liver
Medicine
Insulin
GC 1 compound
2003
38 Citations (Scopus)

Identification of a novel antiapoptotic protein that antagonizes ASK1 and CAD activities

Cho, S. G., Kim, J. W., Lee, Y. H., Hwang, H. S., Kim, M. S., Ryoo, K., Kim, M. J., Noh, K. T., Kim, E. K., Cho, J. H., Yoon, K. W., Cho, E. G., Park, H. S., Chi, S. W., Lee, M. J., Kang, S. S., Ichijo, H. & Choi, E. J., 2003 Oct 13, In : Journal of Cell Biology. 163, 1, p. 71-81 11 p.

Research output: Contribution to journalArticle

MAP Kinase Kinase Kinase 5
Proteins
Apoptosis
caspase-activated DNase inhibitor
caspase-activated deoxyribonuclease
2001
110 Citations (Scopus)

Glucose and Insulin Function through Two Distinct Transcription Factors to Stimulate Expression of Lipogenic Enzyme Genes in Liver

Koo, S. H., Dutcher, A. K. & Towle, H. C., 2001 Mar 23, In : Journal of Biological Chemistry. 276, 12, p. 9437-9445 9 p.

Research output: Contribution to journalArticle

Sterol Regulatory Element Binding Protein 1
Liver
Transcription Factors
Genes
Insulin