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Research Output

  • 3591 Citations
  • 11 h-Index
  • 14 Article
  • 2 Review article
2018

Clipick: A sensitive peak caller for expression-based deconvolution of HITS-CLIP signals

Park, S., Ahn, S. H., Cho, E. S., Cho, Y. K., Jang, E. S. & Chi, S. W., 2018 Jan 1, In : Nucleic acids research. 46, 21, p. 11153-11168 16 p.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Evaluation and control of miRNA-like off-target repression for RNA interference

Seok, H., Lee, H., Jang, E. S. & Chi, S. W., 2018 Mar 1, In : Cellular and Molecular Life Sciences. 75, 5, p. 797-814 18 p.

Research output: Contribution to journalReview article

17 Citations (Scopus)

SiAbasic: A comprehensive database for potent siRNA-6Ø sequences without off-target effects

Park, J., Ahn, S. H., Cho, K. M., Gu, D., Jang, E. S. & Chi, S. W., 2018 Jan 1, In : Database. 2018, 2018

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)
2016

MicroRNA target recognition: Insights from transcriptome-wide non-canonical interactions

Seok, H., Ham, J., Jang, E. S. & Chi, S. W., 2016 May 1, In : Molecules and cells. 39, 5, p. 375-381 7 p.

Research output: Contribution to journalReview article

Open Access
56 Citations (Scopus)

Rationally designed siRNAs without miRNA-like off-target repression

Seok, H., Jang, E. S. & Chi, S. W., 2016 Mar 1, In : BMB reports. 49, 3, p. 135-136 2 p.

Research output: Contribution to journalArticle

Open Access
6 Citations (Scopus)
2015

Abasic pivot substitution harnesses target specificity of RNA interference

Lee, H. S., Seok, H., Lee, D. H., Ham, J., Lee, W., Youm, E. M., Yoo, J. S., Lee, Y. S., Jang, E. S. & Chi, S. W., 2015 Dec 18, In : Nature communications. 6, 10154.

Research output: Contribution to journalArticle

Open Access
15 Citations (Scopus)
2014

EIF4AIII enhances translation of nuclear cap-binding complex-bound mRNAs by promoting disruption of secondary structures in UTR

Choe, J., Ryu, I., Park, O. H., Park, J., Cho, H., Yoo, J. S., Chi, S. W., Kim, M. K., Song, H. K. & Kim, Y. K., 2014 Oct 28, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 43, p. E4577-E4586

Research output: Contribution to journalArticle

31 Citations (Scopus)
2013

MicroRNAs transfected into granulosa cells may regulate oocyte meiotic competence during in vitro maturation of mouse follicles

Kim, Y. J., Ku, S. Y., Kim, Y. Y., Liu, H. C., Chi, S. W., Kim, S. H., Choi, Y. M., Kim, J. G. & Moon, S. Y., 2013 Nov, In : Human Reproduction. 28, 11, p. 3050-3061 12 p.

Research output: Contribution to journalArticle

Open Access
39 Citations (Scopus)

MiRTCat: A comprehensive map of human and mouse microRNA target sites including non-canonical nucleation bulges

Kim, K. K., Ham, J. & Chi, S. W., 2013 Aug 1, In : Bioinformatics. 29, 15, p. 1898-1899 2 p.

Research output: Contribution to journalArticle

Open Access
11 Citations (Scopus)
2012

An alternative mode of microRNA target recognition

Chi, S. W., Hannon, G. J. & Darnell, R. B., 2012 Mar 1, In : Nature Structural and Molecular Biology. 19, 3, p. 321-327 7 p.

Research output: Contribution to journalArticle

232 Citations (Scopus)
2011

FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism

Darnell, J. C., Van Driesche, S. J., Zhang, C., Hung, K. Y. S., Mele, A., Fraser, C. E., Stone, E. F., Chen, C., Fak, J. J., Chi, S. W., Licatalosi, D. D., Richter, J. D. & Darnell, R. B., 2011 Jul 22, In : Cell. 146, 2, p. 247-261 15 p.

Research output: Contribution to journalArticle

Open Access
1042 Citations (Scopus)
2010

MicroRNA expression profiles are altered by gonadotropins and vitamin C status during in vitro follicular growth

Kim, Y. J., Ku, S. Y., Rosenwaks, Z., Liu, H. C., Chi, S. W., Kang, J. S., Lee, W. J., Jung, K. C., Kim, S. H., Choi, Y. M., Kim, J. G. & Moon, S. Y., 2010 Dec 1, In : Reproductive Sciences. 17, 12, p. 1081-1089 9 p.

Research output: Contribution to journalArticle

34 Citations (Scopus)
2009

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

Chi, S. W., Zang, J. B., Mele, A. & Darnell, R. B., 2009 Jul 23, In : Nature. 460, 7254, p. 479-486 8 p.

Research output: Contribution to journalArticle

1216 Citations (Scopus)
2008

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

Licatalosi, D. D., Mele, A., Fak, J. J., Ule, J., Kayikci, M., Chi, S. W., Clark, T. A., Schweitzer, A. C., Blume, J. E., Wang, X., Darnell, J. C. & Darnell, R. B., 2008 Nov 27, In : Nature. 456, 7221, p. 464-469 6 p.

Research output: Contribution to journalArticle

842 Citations (Scopus)
2003

Identification of a novel antiapoptotic protein that antagonizes ASK1 and CAD activities

Cho, S. G., Kim, J. W., Lee, Y. H., Hwang, H. S., Kim, M. S., Ryoo, K., Kim, M. J., Noh, K. T., Kim, E. K., Cho, J. H., Yoon, K. W., Cho, E. G., Park, H. S., Chi, S. W., Lee, M. J., Kang, S. S., Ichijo, H. & Choi, E. J., 2003 Oct 13, In : Journal of Cell Biology. 163, 1, p. 71-81 11 p.

Research output: Contribution to journalArticle

38 Citations (Scopus)

Self-organizing latent lattice models for temporal gene expression profiling

Zhang, B. T., Yang, J. & Chi, S. W., 2003 Jul 1, In : Machine Learning. 52, 1-2, p. 67-89 23 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)