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Research Output 2003 2018

  • 3537 Citations
  • 11 h-Index
  • 14 Article
  • 2 Review article
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Article
2018
1 Citation (Scopus)

Clipick: A sensitive peak caller for expression-based deconvolution of HITS-CLIP signals

Park, S., Ahn, S. H., Cho, E. S., Cho, Y. K., Jang, E. S. & Chi, S. W., 2018 Jan 1, In : Nucleic acids research. 46, 21, p. 11153-11168 16 p.

Research output: Contribution to journalArticle

Open Access
Boidae
High-Throughput Nucleotide Sequencing
Signal-To-Noise Ratio
MicroRNAs
Immunoprecipitation
1 Citation (Scopus)

SiAbasic: A comprehensive database for potent siRNA-6Ø sequences without off-target effects

Park, J., Ahn, S. H., Cho, K. M., Gu, D., Jang, E. S. & Chi, S. W., 2018 Jan 1, In : Database. 2018, 2018

Research output: Contribution to journalArticle

Open Access
small interfering RNA
RNA
Small Interfering RNA
Databases
MicroRNAs
2016
6 Citations (Scopus)

Rationally designed siRNAs without miRNA-like off-target repression

Seok, H., Jang, E. S. & Chi, S. W., 2016 Mar 1, In : BMB reports. 49, 3, p. 135-136 2 p.

Research output: Contribution to journalArticle

Open Access
MicroRNAs
Small Interfering RNA
Nucleation
Substitution reactions
RNA-Induced Silencing Complex
2015
15 Citations (Scopus)

Abasic pivot substitution harnesses target specificity of RNA interference

Lee, H. S., Seok, H., Lee, D. H., Ham, J., Lee, W., Youm, E. M., Yoo, J. S., Lee, Y. S., Jang, E. S. & Chi, S. W., 2015 Dec 18, In : Nature communications. 6, 10154.

Research output: Contribution to journalArticle

Open Access
pivots
harnesses
RNA Interference
MicroRNAs
Substitution reactions
2014
31 Citations (Scopus)

EIF4AIII enhances translation of nuclear cap-binding complex-bound mRNAs by promoting disruption of secondary structures in UTR

Choe, J., Ryu, I., Park, O. H., Park, J., Cho, H., Yoo, J. S., Chi, S. W., Kim, M. K., Song, H. K. & Kim, Y. K., 2014 Oct 28, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 43, p. E4577-E4586

Research output: Contribution to journalArticle

Eukaryotic Initiation Factor-4A
Untranslated Regions
Messenger RNA
Exons
Peptide Initiation Factors
2013
38 Citations (Scopus)

MicroRNAs transfected into granulosa cells may regulate oocyte meiotic competence during in vitro maturation of mouse follicles

Kim, Y. J., Ku, S. Y., Kim, Y. Y., Liu, H. C., Chi, S. W., Kim, S. H., Choi, Y. M., Kim, J. G. & Moon, S. Y., 2013 Jan 1, In : Human Reproduction. 28, 11, p. 3050-3061 12 p.

Research output: Contribution to journalArticle

Open Access
Granulosa Cells
MicroRNAs
Mental Competency
Oocytes
Metaphase
11 Citations (Scopus)

MiRTCat: A comprehensive map of human and mouse microRNA target sites including non-canonical nucleation bulges

Kim, K. K., Ham, J. & Chi, S. W., 2013 Aug 1, In : Bioinformatics. 29, 15, p. 1898-1899 2 p.

Research output: Contribution to journalArticle

Open Access
MicroRNA
MicroRNAs
Nucleation
Mouse
Target
2012
229 Citations (Scopus)

An alternative mode of microRNA target recognition

Chi, S. W., Hannon, G. J. & Darnell, R. B., 2012 Mar 1, In : Nature Structural and Molecular Biology. 19, 3, p. 321-327 7 p.

Research output: Contribution to journalArticle

MicroRNAs
Messenger RNA
Seeds
Brain
Nucleotides
2011
1020 Citations (Scopus)

FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism

Darnell, J. C., Van Driesche, S. J., Zhang, C., Hung, K. Y. S., Mele, A., Fraser, C. E., Stone, E. F., Chen, C., Fak, J. J., Chi, S. W., Licatalosi, D. D., Richter, J. D. & Darnell, R. B., 2011 Jul 22, In : Cell. 146, 2, p. 247-261 15 p.

Research output: Contribution to journalArticle

Open Access
Fragile X Syndrome
Autistic Disorder
Brain
Polyribosomes
RNA
2010
33 Citations (Scopus)

MicroRNA expression profiles are altered by gonadotropins and vitamin C status during in vitro follicular growth

Kim, Y. J., Ku, S. Y., Rosenwaks, Z., Liu, H. C., Chi, S. W., Kang, J. S., Lee, W. J., Jung, K. C., Kim, S. H., Choi, Y. M., Kim, J. G. & Moon, S. Y., 2010 Dec 1, In : Reproductive Sciences. 17, 12, p. 1081-1089 9 p.

Research output: Contribution to journalArticle

Chorionic Gonadotropin
MicroRNAs
Gonadotropins
Granulosa Cells
Ascorbic Acid
2009
1201 Citations (Scopus)

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

Chi, S. W., Zang, J. B., Mele, A. & Darnell, R. B., 2009 Jul 23, In : Nature. 460, 7254, p. 479-486 8 p.

Research output: Contribution to journalArticle

MicroRNAs
Messenger RNA
RNA
High-Throughput Nucleotide Sequencing
Brain
2008
831 Citations (Scopus)

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

Licatalosi, D. D., Mele, A., Fak, J. J., Ule, J., Kayikci, M., Chi, S. W., Clark, T. A., Schweitzer, A. C., Blume, J. E., Wang, X., Darnell, J. C. & Darnell, R. B., 2008 Nov 27, In : Nature. 456, 7221, p. 464-469 6 p.

Research output: Contribution to journalArticle

High-Throughput Nucleotide Sequencing
Immunoprecipitation
Genome
RNA
Brain
2003
38 Citations (Scopus)

Identification of a novel antiapoptotic protein that antagonizes ASK1 and CAD activities

Cho, S. G., Kim, J. W., Lee, Y. H., Hwang, H. S., Kim, M. S., Ryoo, K., Kim, M. J., Noh, K. T., Kim, E. K., Cho, J. H., Yoon, K. W., Cho, E. G., Park, H. S., Chi, S. W., Lee, M. J., Kang, S. S., Ichijo, H. & Choi, E. J., 2003 Oct 13, In : Journal of Cell Biology. 163, 1, p. 71-81 11 p.

Research output: Contribution to journalArticle

MAP Kinase Kinase Kinase 5
Proteins
Apoptosis
caspase-activated DNase inhibitor
caspase-activated deoxyribonuclease
10 Citations (Scopus)

Self-organizing latent lattice models for temporal gene expression profiling

Zhang, B. T., Yang, J. & Chi, S. W., 2003 Jul 1, In : Machine Learning. 52, 1-2, p. 67-89 23 p.

Research output: Contribution to journalArticle

Microarrays
Gene expression
DNA
Genes
Self organizing maps