TY - GEN
T1 - A point says a lot
T2 - 8th International Workshop on Machine Learning in Medical Imaging, MLMI 2017 held in conjunction with the 20th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2017
AU - Sun, Jinquan
AU - Shi, Yinghuan
AU - Gao, Yang
AU - Shen, Dinggang
N1 - Funding Information:
Acknowledgement. This work was supported by NSFC (61673203, 61432008), Nanjing Science and Technique Development Foundation (201503041), Young Elite Scientists Sponsorship Program by CAST (YESS 20160035) and NIH Grant (CA206100).
PY - 2017
Y1 - 2017
N2 - In this paper, we investigate if the MR prostate segmentation performance could be improved, by only providing one-point labeling information in the prostate region. To achieve this goal, by asking the physician to first click one point inside the prostate region, we present a novel segmentation method by simultaneously integrating the boundary detection results and the patch-based prediction. Particularly, since the clicked point belongs to the prostate, we first generate the location-prior maps, with two basic assumptions: (1) a point closer to the clicked point should be with higher probability to be the prostate voxel, (2) a point separated by more boundaries to the clicked point, will have lower chance to be the prostate voxel. We perform the Canny edge detector and obtain two location-prior maps from horizontal and vertical directions, respectively. Then, the obtained location-prior maps along with the original MR images are fed into a multi-channel fully convolutional network to conduct the patch-based prediction. With the obtained prostate-likelihood map, we employ a level-set method to achieve the final segmentation. We evaluate the performance of our method on 22 MR images collected from 22 different patients, with the manual delineation provided as the ground truth for evaluation. The experimental results not only show the promising performance of our method but also demonstrate the one-point labeling could largely enhance the results when a pure patch-based prediction fails.
AB - In this paper, we investigate if the MR prostate segmentation performance could be improved, by only providing one-point labeling information in the prostate region. To achieve this goal, by asking the physician to first click one point inside the prostate region, we present a novel segmentation method by simultaneously integrating the boundary detection results and the patch-based prediction. Particularly, since the clicked point belongs to the prostate, we first generate the location-prior maps, with two basic assumptions: (1) a point closer to the clicked point should be with higher probability to be the prostate voxel, (2) a point separated by more boundaries to the clicked point, will have lower chance to be the prostate voxel. We perform the Canny edge detector and obtain two location-prior maps from horizontal and vertical directions, respectively. Then, the obtained location-prior maps along with the original MR images are fed into a multi-channel fully convolutional network to conduct the patch-based prediction. With the obtained prostate-likelihood map, we employ a level-set method to achieve the final segmentation. We evaluate the performance of our method on 22 MR images collected from 22 different patients, with the manual delineation provided as the ground truth for evaluation. The experimental results not only show the promising performance of our method but also demonstrate the one-point labeling could largely enhance the results when a pure patch-based prediction fails.
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U2 - 10.1007/978-3-319-67389-9_26
DO - 10.1007/978-3-319-67389-9_26
M3 - Conference contribution
AN - SCOPUS:85029716704
SN - 9783319673882
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 220
EP - 228
BT - Machine Learning in Medical Imaging - 8th International Workshop, MLMI 2017, Held in Conjunction with MICCAI 2017, Proceedings
A2 - Shi, Yinghuan
A2 - Suk, Heung-Il
A2 - Suzuki, Kenji
A2 - Wang, Qian
PB - Springer Verlag
Y2 - 10 September 2017 through 10 September 2017
ER -