Arg243, Invariably Critical for the Transcriptional Activation of Yeast Gcn4p

Gyu Chull Cho, Jae Yung Lee, Joon Kim

Research output: Contribution to journalArticle

Abstract

The arginine residue at position 243 (Arg 243) of the yeast transcription factor, Gcn4p, is invariably conserved among bZIP transcription factors. Using site-directed oligonucleotide saturation mutagenesis involving two-step polymerase chain reaction (PGR) amplification, random mutations were successfully introduced at the codon of 243 in the basic domain of Gcn4p. This mutant library was transformed into Gcn4p defective yeast strain and selected for the transcriptionally active colonies. All colonies which were transcriptionally active had arginines in the codon 243. In this study, the strand preference by Taq polymerase during mutagenesis was also tested. Oligonucleotides were specially designed to test whether or not the polymerase was preferred using the strand as a template. A population of randomly mutated products were cloned into an appropriate vector and characterized by DNA sequencing analysis. Saturation mutagenesis which was performed efficiently by this method revealed a strong bias in terms of strand preference of Taq polymerase by an approximate ratio of 3 to 1 in this study.

Original languageEnglish
Pages (from-to)154-158
Number of pages5
JournalJournal of Microbiology
Volume37
Issue number3
Publication statusPublished - 1999 Dec 1

Fingerprint

Taq Polymerase
Codon
Mutagenesis
Transcriptional Activation
Arginine
Yeasts
Basic-Leucine Zipper Transcription Factors
Site-Directed Mutagenesis
DNA Sequence Analysis
Oligonucleotides
Transcription Factors
Polymerase Chain Reaction
Mutation
Population

Keywords

  • Arg243
  • Gcn4p
  • Mutagenesis
  • Two-step polymerase chain reaction

ASJC Scopus subject areas

  • Applied Microbiology and Biotechnology
  • Microbiology

Cite this

Arg243, Invariably Critical for the Transcriptional Activation of Yeast Gcn4p. / Cho, Gyu Chull; Lee, Jae Yung; Kim, Joon.

In: Journal of Microbiology, Vol. 37, No. 3, 01.12.1999, p. 154-158.

Research output: Contribution to journalArticle

Cho, Gyu Chull ; Lee, Jae Yung ; Kim, Joon. / Arg243, Invariably Critical for the Transcriptional Activation of Yeast Gcn4p. In: Journal of Microbiology. 1999 ; Vol. 37, No. 3. pp. 154-158.
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