TY - JOUR
T1 - Automated classification of fMRI data employing trial-based imagery tasks
AU - Lee, Jong Hwan
AU - Marzelli, Matthew
AU - Jolesz, Ferenc A.
AU - Yoo, Seung Schik
N1 - Funding Information:
Authors appreciate the technical support of Ms. Heather O’Leary for the data acquisition, the logistic support of Mr. Dong-Woo Hahn, and the editorial support of Mr. Samuel Polio. This work was partially supported by grants from NIH (R01-NS048242 to Yoo, SS and NIH U41RR019703 to Jolesz FA), the Korean Ministry of Commerce, Industry, and Energy (Grant No. 2004-02012 to S.S. Yoo), and Gachon Neuroscience Research Institute Grant (to Yoo SS).
PY - 2009/6
Y1 - 2009/6
N2 - Automated interpretation and classification of functional MRI (fMRI) data is an emerging research field that enables the characterization of underlying cognitive processes with minimal human intervention. In this work, we present a method for the automated classification of human thoughts reflected on a trial-based paradigm using fMRI with a significantly shortened data acquisition time (less than one minute). Based on our preliminary experience with various cognitive imagery tasks, six characteristic thoughts were chosen as target tasks for the present work: right-hand motor imagery, left-hand motor imagery, right foot motor imagery, mental calculation, internal speech/word generation, and visual imagery. These six tasks were performed by five healthy volunteers and functional images were obtained using a T2*-weighted echo planar imaging (EPI) sequence. Feature vectors from activation maps, necessary for the classification of neural activity, were automatically extracted from the regions that were consistently and exclusively activated for a given task during the training process. Extracted feature vectors were classified using the support vector machine (SVM) algorithm. Parameter optimization, using a k-fold cross validation scheme, allowed the successful recognition of the six different categories of administered thought tasks with an accuracy of 74.5% (mean) ± 14.3% (standard deviation) across all five subjects. Our proposed study for the automated classification of fMRI data may be utilized in further investigations to monitor/identify human thought processes and their potential link to hardware/computer control.
AB - Automated interpretation and classification of functional MRI (fMRI) data is an emerging research field that enables the characterization of underlying cognitive processes with minimal human intervention. In this work, we present a method for the automated classification of human thoughts reflected on a trial-based paradigm using fMRI with a significantly shortened data acquisition time (less than one minute). Based on our preliminary experience with various cognitive imagery tasks, six characteristic thoughts were chosen as target tasks for the present work: right-hand motor imagery, left-hand motor imagery, right foot motor imagery, mental calculation, internal speech/word generation, and visual imagery. These six tasks were performed by five healthy volunteers and functional images were obtained using a T2*-weighted echo planar imaging (EPI) sequence. Feature vectors from activation maps, necessary for the classification of neural activity, were automatically extracted from the regions that were consistently and exclusively activated for a given task during the training process. Extracted feature vectors were classified using the support vector machine (SVM) algorithm. Parameter optimization, using a k-fold cross validation scheme, allowed the successful recognition of the six different categories of administered thought tasks with an accuracy of 74.5% (mean) ± 14.3% (standard deviation) across all five subjects. Our proposed study for the automated classification of fMRI data may be utilized in further investigations to monitor/identify human thought processes and their potential link to hardware/computer control.
KW - Brain-computer interface (BCI)
KW - Functional MRI
KW - Neuroimaging
KW - Pattern recognition
KW - Support vector machine (SVM)
UR - http://www.scopus.com/inward/record.url?scp=67349187397&partnerID=8YFLogxK
U2 - 10.1016/j.media.2009.01.001
DO - 10.1016/j.media.2009.01.001
M3 - Article
C2 - 19233711
AN - SCOPUS:67349187397
SN - 1361-8415
VL - 13
SP - 392
EP - 404
JO - Medical Image Analysis
JF - Medical Image Analysis
IS - 3
ER -