Characterization of seashore paspalum (Paspalum vaginatum Swartz) germplasm by transferred SSRs from wheat, maize and sorghum

M. L. Wang, Z. B. Chen, N. A. Barkley, M. L. Newman, W. Kim, P. Raymer, G. A. Pederson

Research output: Contribution to journalArticle

14 Citations (Scopus)

Abstract

One hundred and thirty SSR markers from wheat, maize and sorghum were screened for the transferability to Paspalum. The transfer rate was 67.5, 49.0 and 66.8% respectively. This would be a very efficient approach for DNA marker development for species which are not well studied molecularly. The polymorphism level for transferred SSR markers was 51.5% within species (Paspalum vaginatum) and 87.1% among Paspalum species. The high level of polymorphism is directly related to the high degree of heterozygosity maintained by its way of reproduction, i.e. self-incompatibility. Forty transferred polymorphic SSR markers were selected and used for characterization and evaluation of seventy-three Paspalum accessions. In total, 209 polymorphic bands were detected from these 40 SSR markers, with an average of five polymorphic bands per marker. The Paspalum accessions clustered into three major groups. Two very similar dendrograms can be generated from either 109 or 209 polymorphic bands. This led us to determine that 18 of the transferred SSR markers were sufficient for genetically differentiating the investigated germplasm accessions. The number of SSR markers required for germplasm characterization and evaluation is discussed. This is the first report of the transfer of SSR markers from major field crops to newly emerged environmental turfgrasses.

Original languageEnglish
Pages (from-to)779-791
Number of pages13
JournalGenetic Resources and Crop Evolution
Volume53
Issue number4
DOIs
Publication statusPublished - 2006 Jun 1

Keywords

  • Characterization
  • Germplasm
  • Paspalum
  • SSR
  • Transferability

ASJC Scopus subject areas

  • Ecology, Evolution, Behavior and Systematics
  • Agronomy and Crop Science
  • Genetics
  • Plant Science

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