Complete genome sequence data of Flavobacterium anhuiense strain GSE09, a volatile-producing biocontrol bacterium isolated from cucumber (Cucumis sativus) root

Jin Ju Jeong; Siti Sajidah; Ji Yeon Oh; Mee Kyung Sang; Kyoung Su Kim; Ki Deok Kim

doi:10.1016/j.dib.2019.104270

Complete genome sequence data of Flavobacterium anhuiense strain GSE09, a volatile-producing biocontrol bacterium isolated from cucumber (Cucumis sativus) root

Jin Ju Jeong, Siti Sajidah, Ji Yeon Oh, Mee Kyung Sang, Kyoung Su Kim, Ki Deok Kim

Department of Biosystems and Biotechnology

Research output: Contribution to journal › Article › peer-review

3 Citations (Scopus)

Abstract

Flavobacterium anhuiense (previously identified as Flavobacterium johnsoniae) strain GSE09 is a volatile-producing bacterium that exhibits significant biocontrol activity against an oomycete pathogen, Phytophthora capsici, on pepper plants. Here, we report the complete genome sequence data of strain GSE09, isolated from surface-sterilized cucumber root. The genome consists of a circular 5,109,718-bp chromosome with a G + C content of 34.30%. A total of 4,138 complete coding sequences including 15 rRNA, 66 tRNA, 3 ncRNA, and 51 pseudogene sequences were retrieved. Thus, the genome sequence data of F. anhuiense GSE09 may facilitate the elucidation of many biological traits related to the biocontrol against plant pathogens.

Original language	English
Article number	104270
Journal	Data in Brief
Volume	25
DOIs	https://doi.org/10.1016/j.dib.2019.104270
Publication status	Published - 2019 Aug

Keywords

Biocontrol
Complete genome sequence
EggNOG analysis
Flavobacterium anhuiense
Phytophthora capsici

ASJC Scopus subject areas

General

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10.1016/j.dib.2019.104270

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title = "Complete genome sequence data of Flavobacterium anhuiense strain GSE09, a volatile-producing biocontrol bacterium isolated from cucumber (Cucumis sativus) root",

abstract = "Flavobacterium anhuiense (previously identified as Flavobacterium johnsoniae) strain GSE09 is a volatile-producing bacterium that exhibits significant biocontrol activity against an oomycete pathogen, Phytophthora capsici, on pepper plants. Here, we report the complete genome sequence data of strain GSE09, isolated from surface-sterilized cucumber root. The genome consists of a circular 5,109,718-bp chromosome with a G + C content of 34.30%. A total of 4,138 complete coding sequences including 15 rRNA, 66 tRNA, 3 ncRNA, and 51 pseudogene sequences were retrieved. Thus, the genome sequence data of F. anhuiense GSE09 may facilitate the elucidation of many biological traits related to the biocontrol against plant pathogens.",

keywords = "Biocontrol, Complete genome sequence, EggNOG analysis, Flavobacterium anhuiense, Phytophthora capsici",

author = "Jeong, {Jin Ju} and Siti Sajidah and Oh, {Ji Yeon} and Sang, {Mee Kyung} and Kim, {Kyoung Su} and Kim, {Ki Deok}",

note = "Funding Information: Jin-Ju Jeong was supported by the Global Ph.D. program through the National Research Foundation of Korea funded by the Ministry of Education ( 2015-034526 ), South Korea. Siti Sajidah was supported by the Korean Government Scholarship Program (KGSP) during her M.S. study at Korea University , Seoul, South Korea. Publisher Copyright: {\textcopyright} 2019 The Authors",

year = "2019",

month = aug,

doi = "10.1016/j.dib.2019.104270",

language = "English",

volume = "25",

journal = "Data in Brief",

issn = "2352-3409",

publisher = "Elsevier BV",

}

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T1 - Complete genome sequence data of Flavobacterium anhuiense strain GSE09, a volatile-producing biocontrol bacterium isolated from cucumber (Cucumis sativus) root

AU - Jeong, Jin Ju

AU - Sajidah, Siti

AU - Oh, Ji Yeon

AU - Sang, Mee Kyung

AU - Kim, Kyoung Su

AU - Kim, Ki Deok

N1 - Funding Information: Jin-Ju Jeong was supported by the Global Ph.D. program through the National Research Foundation of Korea funded by the Ministry of Education ( 2015-034526 ), South Korea. Siti Sajidah was supported by the Korean Government Scholarship Program (KGSP) during her M.S. study at Korea University , Seoul, South Korea. Publisher Copyright: © 2019 The Authors

PY - 2019/8

Y1 - 2019/8

N2 - Flavobacterium anhuiense (previously identified as Flavobacterium johnsoniae) strain GSE09 is a volatile-producing bacterium that exhibits significant biocontrol activity against an oomycete pathogen, Phytophthora capsici, on pepper plants. Here, we report the complete genome sequence data of strain GSE09, isolated from surface-sterilized cucumber root. The genome consists of a circular 5,109,718-bp chromosome with a G + C content of 34.30%. A total of 4,138 complete coding sequences including 15 rRNA, 66 tRNA, 3 ncRNA, and 51 pseudogene sequences were retrieved. Thus, the genome sequence data of F. anhuiense GSE09 may facilitate the elucidation of many biological traits related to the biocontrol against plant pathogens.

AB - Flavobacterium anhuiense (previously identified as Flavobacterium johnsoniae) strain GSE09 is a volatile-producing bacterium that exhibits significant biocontrol activity against an oomycete pathogen, Phytophthora capsici, on pepper plants. Here, we report the complete genome sequence data of strain GSE09, isolated from surface-sterilized cucumber root. The genome consists of a circular 5,109,718-bp chromosome with a G + C content of 34.30%. A total of 4,138 complete coding sequences including 15 rRNA, 66 tRNA, 3 ncRNA, and 51 pseudogene sequences were retrieved. Thus, the genome sequence data of F. anhuiense GSE09 may facilitate the elucidation of many biological traits related to the biocontrol against plant pathogens.

KW - Biocontrol

KW - Complete genome sequence

KW - EggNOG analysis

KW - Flavobacterium anhuiense

KW - Phytophthora capsici

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U2 - 10.1016/j.dib.2019.104270

DO - 10.1016/j.dib.2019.104270

M3 - Article

AN - SCOPUS:85069938179

SN - 2352-3409

VL - 25

JO - Data in Brief

JF - Data in Brief

M1 - 104270

ER -

Complete genome sequence data of Flavobacterium anhuiense strain GSE09, a volatile-producing biocontrol bacterium isolated from cucumber (Cucumis sativus) root

Abstract

Keywords

ASJC Scopus subject areas

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