Cortical correspondence via sulcal curve-constrained spherical registration with application to macaque studies

Ilwoo Lyu, Sun Hyung Kim, Jun Kyung Seong, Sang Wook Yoo, Alan C. Evans, Yundi Shi, Mar Sanchez, Marc Niethammer, Martin Styner

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Abstract

In this work, we present a novel cortical correspondence method with application to the macaque brain. The correspondence method is based on sulcal curve constraints on a spherical deformable registration using spherical harmonics to parameterize the spherical deformation. Starting from structural MR images, we first apply existing preprocessing steps: brain tissue segmentation using the Automatic Brain Classification tool (ABC), as well as cortical surface reconstruction and spherical parametrization of the cortical surface via Constrained Laplacian-based Automated Segmentation with Proximities (CLASP). Then, initial correspondence between two cortical surfaces is automatically determined by a curve labeling method using sulcal landmarks extracted along sulcal fundic regions. Since the initial correspondence is limited to sulcal regions, we use spherical harmonics to extrapolate and regularize this correspondence to the entire cortical surface. To further improve the correspon- dence, we compute a spherical registration that optimizes the spherical harmonic parameterized deformation using a metric that incorporates the error over the sulcal landmarks as well as the normalized cross correlation of sulcal depth maps over the whole cortical surface. For evaluation, a normal 18-months-old macaque brain (for both left and right hemispheres) was matched to a prior macaque brain template with 9 manually labeled, major sulcal curves. The results show successful registration using the proposed registration approach. Evaluation results for optimal parameter settings are presented as well.

Original languageEnglish
Title of host publicationProgress in Biomedical Optics and Imaging - Proceedings of SPIE
Volume8669
DOIs
Publication statusPublished - 2013 Jun 3
Externally publishedYes
EventMedical Imaging 2013: Image Processing - Lake Buena Vista, FL, United States
Duration: 2013 Feb 102013 Feb 12

Other

OtherMedical Imaging 2013: Image Processing
CountryUnited States
CityLake Buena Vista, FL
Period13/2/1013/2/12

Fingerprint

Macaca
brain
Brain
spherical harmonics
curves
landmarks
Surface reconstruction
evaluation
preprocessing
hemispheres
cross correlation
Labeling
marking
proximity
templates
Tissue

Keywords

  • Cortical correspondence
  • Spherical harmonics
  • Sulcal curve
  • Surface registration

ASJC Scopus subject areas

  • Atomic and Molecular Physics, and Optics
  • Electronic, Optical and Magnetic Materials
  • Biomaterials
  • Radiology Nuclear Medicine and imaging

Cite this

Lyu, I., Kim, S. H., Seong, J. K., Yoo, S. W., Evans, A. C., Shi, Y., ... Styner, M. (2013). Cortical correspondence via sulcal curve-constrained spherical registration with application to macaque studies. In Progress in Biomedical Optics and Imaging - Proceedings of SPIE (Vol. 8669). [86692X] https://doi.org/10.1117/12.2006459

Cortical correspondence via sulcal curve-constrained spherical registration with application to macaque studies. / Lyu, Ilwoo; Kim, Sun Hyung; Seong, Jun Kyung; Yoo, Sang Wook; Evans, Alan C.; Shi, Yundi; Sanchez, Mar; Niethammer, Marc; Styner, Martin.

Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8669 2013. 86692X.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Lyu, I, Kim, SH, Seong, JK, Yoo, SW, Evans, AC, Shi, Y, Sanchez, M, Niethammer, M & Styner, M 2013, Cortical correspondence via sulcal curve-constrained spherical registration with application to macaque studies. in Progress in Biomedical Optics and Imaging - Proceedings of SPIE. vol. 8669, 86692X, Medical Imaging 2013: Image Processing, Lake Buena Vista, FL, United States, 13/2/10. https://doi.org/10.1117/12.2006459
Lyu I, Kim SH, Seong JK, Yoo SW, Evans AC, Shi Y et al. Cortical correspondence via sulcal curve-constrained spherical registration with application to macaque studies. In Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8669. 2013. 86692X https://doi.org/10.1117/12.2006459
Lyu, Ilwoo ; Kim, Sun Hyung ; Seong, Jun Kyung ; Yoo, Sang Wook ; Evans, Alan C. ; Shi, Yundi ; Sanchez, Mar ; Niethammer, Marc ; Styner, Martin. / Cortical correspondence via sulcal curve-constrained spherical registration with application to macaque studies. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8669 2013.
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