Cystatin B homolog from rock bream Oplegnathus fasciatus

Genomic characterization, transcriptional profiling and protease-inhibitory activity of recombinant protein

H. K A Premachandra, Ilson Whang, Young Deuk Lee, Sukkyoung Lee, Mahanama De Zoysa, Myung Joo Oh, Sung Ju Jung, Bong Soo Lim, Jae Koo Noh, Hae Chul Park, Jehee Lee

Research output: Contribution to journalArticle

9 Citations (Scopus)

Abstract

Cysteine proteases are present in all living organisms and, in animals, function in a vast array of physiological and pathological processes. Cysteine protease inhibitors act upon the cysteine proteases to regulate their activity. The cystatin superfamily of cysteine protease inhibitors has members represented in all living organisms studied to date. Here, we report the identification of a new member of the family 1 cystatin in Oplegnathus fasciatus rock bream (denoted as RbCyt B) and the characterization at the molecular level. The complete genomic sequence of RbCyt B consists of three exons and a promoter region. The open reading frame (ORF) encodes for a 100 amino acids length polypeptide with a single cystatin-like domain and a cysteine protease inhibitor signature motif. The conserved N-terminal glycine, glutamine-valine-glycine motif, QxVxG, and a variant of the proline-tryptophan, PW, motif were identified. RbCyt B showed closest phylogenetic distance to Dicentrarchus labrax cystatin B, and shared up to 73% amino acid identity and 90% amino acid similarity with known cystatin B genes. RbCyt B mRNA expression was detected in nine different tissues and was highly expressed in liver, spleen, gill, brain, intestine, kidney, head kidney, and blood, as compared with muscle. In vivo immune stimulation with Edwardsiella tarda bacteria caused significant up-regulation of RbCyt B mRNA in head kidney and spleen at 24h post-infection (P<0.05). Recombinant RbCyt B was expressed in Escherichia coli, and the purified protein demonstrated 82% papain inhibitory activity at 500×10 -3μgμL -1 in a concentration-dependent manner. These results suggest that RbCyt B is a member of family 1 cystatin with high homology to cystatin B, and is a biologically active protein possessing papain inhibitory activity and potentially involved in immune responses against invading Gram-negative bacteria in rock bream.

Original languageEnglish
Pages (from-to)138-146
Number of pages9
JournalComparative Biochemistry and Physiology - B Biochemistry and Molecular Biology
Volume163
Issue number1
DOIs
Publication statusPublished - 2012 Sep 1

Fingerprint

Cystatin B
Cystatins
Cysteine Proteinase Inhibitors
Recombinant Proteins
Peptide Hydrolases
Rocks
Head Kidney
Papain
Cysteine Proteases
Amino Acids
Glycine
Bacteria
Edwardsiella tarda
Spleen
Physiological Phenomena
Bass
Messenger RNA
Escherichia coli Proteins
Valine
Pathologic Processes

Keywords

  • Bacterial challenge
  • Cystatin B
  • Papain inhibition
  • Rock bream
  • Transcriptional analysis

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Biology
  • Physiology

Cite this

Cystatin B homolog from rock bream Oplegnathus fasciatus : Genomic characterization, transcriptional profiling and protease-inhibitory activity of recombinant protein. / Premachandra, H. K A; Whang, Ilson; Lee, Young Deuk; Lee, Sukkyoung; De Zoysa, Mahanama; Oh, Myung Joo; Jung, Sung Ju; Lim, Bong Soo; Noh, Jae Koo; Park, Hae Chul; Lee, Jehee.

In: Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology, Vol. 163, No. 1, 01.09.2012, p. 138-146.

Research output: Contribution to journalArticle

Premachandra, H. K A ; Whang, Ilson ; Lee, Young Deuk ; Lee, Sukkyoung ; De Zoysa, Mahanama ; Oh, Myung Joo ; Jung, Sung Ju ; Lim, Bong Soo ; Noh, Jae Koo ; Park, Hae Chul ; Lee, Jehee. / Cystatin B homolog from rock bream Oplegnathus fasciatus : Genomic characterization, transcriptional profiling and protease-inhibitory activity of recombinant protein. In: Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology. 2012 ; Vol. 163, No. 1. pp. 138-146.
@article{6ff3d345c899467d95c7f6b6c597f468,
title = "Cystatin B homolog from rock bream Oplegnathus fasciatus: Genomic characterization, transcriptional profiling and protease-inhibitory activity of recombinant protein",
abstract = "Cysteine proteases are present in all living organisms and, in animals, function in a vast array of physiological and pathological processes. Cysteine protease inhibitors act upon the cysteine proteases to regulate their activity. The cystatin superfamily of cysteine protease inhibitors has members represented in all living organisms studied to date. Here, we report the identification of a new member of the family 1 cystatin in Oplegnathus fasciatus rock bream (denoted as RbCyt B) and the characterization at the molecular level. The complete genomic sequence of RbCyt B consists of three exons and a promoter region. The open reading frame (ORF) encodes for a 100 amino acids length polypeptide with a single cystatin-like domain and a cysteine protease inhibitor signature motif. The conserved N-terminal glycine, glutamine-valine-glycine motif, QxVxG, and a variant of the proline-tryptophan, PW, motif were identified. RbCyt B showed closest phylogenetic distance to Dicentrarchus labrax cystatin B, and shared up to 73{\%} amino acid identity and 90{\%} amino acid similarity with known cystatin B genes. RbCyt B mRNA expression was detected in nine different tissues and was highly expressed in liver, spleen, gill, brain, intestine, kidney, head kidney, and blood, as compared with muscle. In vivo immune stimulation with Edwardsiella tarda bacteria caused significant up-regulation of RbCyt B mRNA in head kidney and spleen at 24h post-infection (P<0.05). Recombinant RbCyt B was expressed in Escherichia coli, and the purified protein demonstrated 82{\%} papain inhibitory activity at 500×10 -3μgμL -1 in a concentration-dependent manner. These results suggest that RbCyt B is a member of family 1 cystatin with high homology to cystatin B, and is a biologically active protein possessing papain inhibitory activity and potentially involved in immune responses against invading Gram-negative bacteria in rock bream.",
keywords = "Bacterial challenge, Cystatin B, Papain inhibition, Rock bream, Transcriptional analysis",
author = "Premachandra, {H. K A} and Ilson Whang and Lee, {Young Deuk} and Sukkyoung Lee and {De Zoysa}, Mahanama and Oh, {Myung Joo} and Jung, {Sung Ju} and Lim, {Bong Soo} and Noh, {Jae Koo} and Park, {Hae Chul} and Jehee Lee",
year = "2012",
month = "9",
day = "1",
doi = "10.1016/j.cbpb.2012.05.012",
language = "English",
volume = "163",
pages = "138--146",
journal = "Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology",
issn = "1096-4959",
publisher = "Elsevier Inc.",
number = "1",

}

TY - JOUR

T1 - Cystatin B homolog from rock bream Oplegnathus fasciatus

T2 - Genomic characterization, transcriptional profiling and protease-inhibitory activity of recombinant protein

AU - Premachandra, H. K A

AU - Whang, Ilson

AU - Lee, Young Deuk

AU - Lee, Sukkyoung

AU - De Zoysa, Mahanama

AU - Oh, Myung Joo

AU - Jung, Sung Ju

AU - Lim, Bong Soo

AU - Noh, Jae Koo

AU - Park, Hae Chul

AU - Lee, Jehee

PY - 2012/9/1

Y1 - 2012/9/1

N2 - Cysteine proteases are present in all living organisms and, in animals, function in a vast array of physiological and pathological processes. Cysteine protease inhibitors act upon the cysteine proteases to regulate their activity. The cystatin superfamily of cysteine protease inhibitors has members represented in all living organisms studied to date. Here, we report the identification of a new member of the family 1 cystatin in Oplegnathus fasciatus rock bream (denoted as RbCyt B) and the characterization at the molecular level. The complete genomic sequence of RbCyt B consists of three exons and a promoter region. The open reading frame (ORF) encodes for a 100 amino acids length polypeptide with a single cystatin-like domain and a cysteine protease inhibitor signature motif. The conserved N-terminal glycine, glutamine-valine-glycine motif, QxVxG, and a variant of the proline-tryptophan, PW, motif were identified. RbCyt B showed closest phylogenetic distance to Dicentrarchus labrax cystatin B, and shared up to 73% amino acid identity and 90% amino acid similarity with known cystatin B genes. RbCyt B mRNA expression was detected in nine different tissues and was highly expressed in liver, spleen, gill, brain, intestine, kidney, head kidney, and blood, as compared with muscle. In vivo immune stimulation with Edwardsiella tarda bacteria caused significant up-regulation of RbCyt B mRNA in head kidney and spleen at 24h post-infection (P<0.05). Recombinant RbCyt B was expressed in Escherichia coli, and the purified protein demonstrated 82% papain inhibitory activity at 500×10 -3μgμL -1 in a concentration-dependent manner. These results suggest that RbCyt B is a member of family 1 cystatin with high homology to cystatin B, and is a biologically active protein possessing papain inhibitory activity and potentially involved in immune responses against invading Gram-negative bacteria in rock bream.

AB - Cysteine proteases are present in all living organisms and, in animals, function in a vast array of physiological and pathological processes. Cysteine protease inhibitors act upon the cysteine proteases to regulate their activity. The cystatin superfamily of cysteine protease inhibitors has members represented in all living organisms studied to date. Here, we report the identification of a new member of the family 1 cystatin in Oplegnathus fasciatus rock bream (denoted as RbCyt B) and the characterization at the molecular level. The complete genomic sequence of RbCyt B consists of three exons and a promoter region. The open reading frame (ORF) encodes for a 100 amino acids length polypeptide with a single cystatin-like domain and a cysteine protease inhibitor signature motif. The conserved N-terminal glycine, glutamine-valine-glycine motif, QxVxG, and a variant of the proline-tryptophan, PW, motif were identified. RbCyt B showed closest phylogenetic distance to Dicentrarchus labrax cystatin B, and shared up to 73% amino acid identity and 90% amino acid similarity with known cystatin B genes. RbCyt B mRNA expression was detected in nine different tissues and was highly expressed in liver, spleen, gill, brain, intestine, kidney, head kidney, and blood, as compared with muscle. In vivo immune stimulation with Edwardsiella tarda bacteria caused significant up-regulation of RbCyt B mRNA in head kidney and spleen at 24h post-infection (P<0.05). Recombinant RbCyt B was expressed in Escherichia coli, and the purified protein demonstrated 82% papain inhibitory activity at 500×10 -3μgμL -1 in a concentration-dependent manner. These results suggest that RbCyt B is a member of family 1 cystatin with high homology to cystatin B, and is a biologically active protein possessing papain inhibitory activity and potentially involved in immune responses against invading Gram-negative bacteria in rock bream.

KW - Bacterial challenge

KW - Cystatin B

KW - Papain inhibition

KW - Rock bream

KW - Transcriptional analysis

UR - http://www.scopus.com/inward/record.url?scp=84862982668&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=84862982668&partnerID=8YFLogxK

U2 - 10.1016/j.cbpb.2012.05.012

DO - 10.1016/j.cbpb.2012.05.012

M3 - Article

VL - 163

SP - 138

EP - 146

JO - Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology

JF - Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology

SN - 1096-4959

IS - 1

ER -