Globally Optimized Super-Resolution of Diffusion MRI Data via Fiber Continuity

Ye Wu; Yoonmi Hong; Sahar Ahmad; Wei Tang Chang; Weili Lin; Dinggang Shen; Pew Thian Yap

doi:10.1007/978-3-030-59728-3_26

Globally Optimized Super-Resolution of Diffusion MRI Data via Fiber Continuity

Ye Wu, Yoonmi Hong, Sahar Ahmad, Wei Tang Chang, Weili Lin, Dinggang Shen, Pew Thian Yap

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

In this paper, we introduce a technique for super-resolution reconstruction of diffusion MRI, harnessing fiber-continuity (FC) as a constraint in a global whole-brain optimization framework. FC is a biologically-motivated constraint that relates orientation information between neighboring voxels. We show that it can be used to effectively constrain the inverse problem of recovering high-resolution data from low-resolution data. Since voxels are inter-related by FC, we devise a global optimization framework that allows solutions pertaining to all voxels to be solved simultaneously. We demonstrate that the proposed super-resolution framework is effective for diffusion MRI data of a glioma patient, a healthy subject, and a macaque.

Original language	English
Title of host publication	Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings
Editors	Anne L. Martel, Purang Abolmaesumi, Danail Stoyanov, Diana Mateus, Maria A. Zuluaga, S. Kevin Zhou, Daniel Racoceanu, Leo Joskowicz
Publisher	Springer Science and Business Media Deutschland GmbH
Pages	260-269
Number of pages	10
ISBN (Print)	9783030597276
DOIs	https://doi.org/10.1007/978-3-030-59728-3_26
Publication status	Published - 2020
Externally published	Yes
Event	23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2020 - Lima, Peru Duration: 2020 Oct 4 → 2020 Oct 8

Publication series

Name	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume	12267 LNCS
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Conference

Conference	23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2020
Country	Peru
City	Lima
Period	20/10/4 → 20/10/8

Keywords

Diffusion MRI
Fiber continuity
Super-resolution

ASJC Scopus subject areas

Theoretical Computer Science
Computer Science(all)

Access to Document

10.1007/978-3-030-59728-3_26

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Wu, Y., Hong, Y., Ahmad, S., Chang, W. T., Lin, W., Shen, D., & Yap, P. T. (2020). Globally Optimized Super-Resolution of Diffusion MRI Data via Fiber Continuity. In A. L. Martel, P. Abolmaesumi, D. Stoyanov, D. Mateus, M. A. Zuluaga, S. K. Zhou, D. Racoceanu, & L. Joskowicz (Eds.), Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings (pp. 260-269). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 12267 LNCS). Springer Science and Business Media Deutschland GmbH. https://doi.org/10.1007/978-3-030-59728-3_26

Globally Optimized Super-Resolution of Diffusion MRI Data via Fiber Continuity. / Wu, Ye; Hong, Yoonmi; Ahmad, Sahar; Chang, Wei Tang; Lin, Weili; Shen, Dinggang; Yap, Pew Thian.

Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings. ed. / Anne L. Martel; Purang Abolmaesumi; Danail Stoyanov; Diana Mateus; Maria A. Zuluaga; S. Kevin Zhou; Daniel Racoceanu; Leo Joskowicz. Springer Science and Business Media Deutschland GmbH, 2020. p. 260-269 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 12267 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Wu, Y, Hong, Y, Ahmad, S, Chang, WT, Lin, W, Shen, D & Yap, PT 2020, Globally Optimized Super-Resolution of Diffusion MRI Data via Fiber Continuity. in AL Martel, P Abolmaesumi, D Stoyanov, D Mateus, MA Zuluaga, SK Zhou, D Racoceanu & L Joskowicz (eds), Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 12267 LNCS, Springer Science and Business Media Deutschland GmbH, pp. 260-269, 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2020, Lima, Peru, 20/10/4. https://doi.org/10.1007/978-3-030-59728-3_26

Wu Y, Hong Y, Ahmad S, Chang WT, Lin W, Shen D et al. Globally Optimized Super-Resolution of Diffusion MRI Data via Fiber Continuity. In Martel AL, Abolmaesumi P, Stoyanov D, Mateus D, Zuluaga MA, Zhou SK, Racoceanu D, Joskowicz L, editors, Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings. Springer Science and Business Media Deutschland GmbH. 2020. p. 260-269. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). https://doi.org/10.1007/978-3-030-59728-3_26

Wu, Ye ; Hong, Yoonmi ; Ahmad, Sahar ; Chang, Wei Tang ; Lin, Weili ; Shen, Dinggang ; Yap, Pew Thian. / Globally Optimized Super-Resolution of Diffusion MRI Data via Fiber Continuity. Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings. editor / Anne L. Martel ; Purang Abolmaesumi ; Danail Stoyanov ; Diana Mateus ; Maria A. Zuluaga ; S. Kevin Zhou ; Daniel Racoceanu ; Leo Joskowicz. Springer Science and Business Media Deutschland GmbH, 2020. pp. 260-269 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

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abstract = "In this paper, we introduce a technique for super-resolution reconstruction of diffusion MRI, harnessing fiber-continuity (FC) as a constraint in a global whole-brain optimization framework. FC is a biologically-motivated constraint that relates orientation information between neighboring voxels. We show that it can be used to effectively constrain the inverse problem of recovering high-resolution data from low-resolution data. Since voxels are inter-related by FC, we devise a global optimization framework that allows solutions pertaining to all voxels to be solved simultaneously. We demonstrate that the proposed super-resolution framework is effective for diffusion MRI data of a glioma patient, a healthy subject, and a macaque.",

keywords = "Diffusion MRI, Fiber continuity, Super-resolution",

author = "Ye Wu and Yoonmi Hong and Sahar Ahmad and Chang, {Wei Tang} and Weili Lin and Dinggang Shen and Yap, {Pew Thian}",

note = "Funding Information: This work was supported in part by NIH grants (NS093842 and EB006733). Publisher Copyright: {\textcopyright} 2020, Springer Nature Switzerland AG.; 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2020 ; Conference date: 04-10-2020 Through 08-10-2020",

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Globally Optimized Super-Resolution of Diffusion MRI Data via Fiber Continuity

Abstract

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Keywords

ASJC Scopus subject areas

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