Identification of σB-dependent promoters using consensus-directed search of Streptomyces coelicolor genome

Eun-Jin Lee, You Hee Cho, Hyo Sub Kim, Jung Hye Roe

Research output: Contribution to journalArticle

13 Citations (Scopus)

Abstract

σB plays an important role in both osmoprotection and proper differentiation in Streptomyces coelicolor A3(2). We searched for candidate members of the σB regulon from the genome database, using the consensus promoter sequence (GNNTN14-16GGGTAC/T). The list consists of 115 genes, and includes all the known σB target genes and many other genes whose functions are related to stress protection and differentiation.

Original languageEnglish
Pages (from-to)147-151
Number of pages5
JournalJournal of Microbiology
Volume42
Issue number2
Publication statusPublished - 2004 Jun 1
Externally publishedYes

Fingerprint

Streptomyces coelicolor
Genome
Genes
Regulon
Consensus Sequence
Databases

Keywords

  • Differentiation
  • Osmotic stress
  • Sigma B (σ)
  • Streptomyces coelicolor

ASJC Scopus subject areas

  • Microbiology
  • Applied Microbiology and Biotechnology

Cite this

Identification of σB-dependent promoters using consensus-directed search of Streptomyces coelicolor genome. / Lee, Eun-Jin; Cho, You Hee; Kim, Hyo Sub; Roe, Jung Hye.

In: Journal of Microbiology, Vol. 42, No. 2, 01.06.2004, p. 147-151.

Research output: Contribution to journalArticle

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