Loading device effect on protein unfolding mechanics

Gwonchan Yoon, Sung Soo Na, Kilho Eom

Research output: Contribution to journalArticle

7 Citations (Scopus)

Abstract

Single-molecule mechanical manipulation has enabled quantitative understanding of not only the kinetics of both bond rupture and protein unfolding, but also the free energy landscape of chemical bond andor protein folding. Despite recent studies reporting the role of loading device in bond rupture, a loading device effect on protein unfolding mechanics has not been well studied. In this work, we have studied the effect of loading-device stiffness on the kinetics of both bond rupture and protein unfolding mechanics using Brownian dynamics simulations. It is shown that bond rupture forces are dependent on not only loading rate but also the stiffness of loading device, and that protein unfolding mechanics is highly correlated with the stiffness of loading device. Our study sheds light on the importance of loading device effect on the mechanically induced bond ruptures and protein unfolding.

Original languageEnglish
Article number025102
JournalJournal of Chemical Physics
Volume137
Issue number2
DOIs
Publication statusPublished - 2012 Jul 14

Fingerprint

Protein Unfolding
Mechanics
Rupture
proteins
Equipment and Supplies
stiffness
Proteins
Stiffness
Protein folding
loading rate
Kinetics
Chemical bonds
Protein Folding
kinetics
chemical bonds
folding
Free energy
manipulators
free energy
Molecules

ASJC Scopus subject areas

  • Physical and Theoretical Chemistry
  • Medicine(all)
  • Physics and Astronomy(all)

Cite this

Loading device effect on protein unfolding mechanics. / Yoon, Gwonchan; Na, Sung Soo; Eom, Kilho.

In: Journal of Chemical Physics, Vol. 137, No. 2, 025102, 14.07.2012.

Research output: Contribution to journalArticle

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