Meta-analysis of genome-wide association studies identifies multiple lung cancer susceptibility loci in never-smoking Asian women

Zhaoming Wang; Wei Jie Seow; Kouya Shiraishi; Chao A. Hsiung; Keitaro Matsuo; Jie Liu; Kexin Chen; Taiki Yamji; Yang Yang; I. Shou Chang; Chen Wu; Yun Chul Hong; Laurie Burdett; Kathleen Wyatt; Charles C. Chung; Shengchao A. Li; Meredith Yeager; Amy Hutchinson; Wei Hu; Neil Caporaso; Maria T. Landi; Nilanjan Chatterjee; Minsun Song; Joseph F. Fraumeni; Takashi Kohno; Jun Yokota; Hideo Kunitoh; Kyota Ashikawa; Yukihide Momozawa; Yataro Daigo; Tetsuya Mitsudomi; Yasushi Yatabe; Toyoaki Hida; Zhibin Hu; Juncheng Dai; Hongxia Ma; Guangfu Jin; Bao Song; Zhehai Wang; Sensen Cheng; Zhihua Yin; Xuelian Li; Yangwu Ren; Peng Guan; Jiang Chang; Wen Tan; Chien Jen Chen; Gee Chen Chang; Ying Huang Tsai; Wu Chou Su; Kuan Yu Chen; Ming Shyan Huang; Yuh Min Chen; Hong Zheng; Haixin Li; Ping Cui; Huan Guo; Ping Xu; Li Liu; Motoki Iwasaki; Taichi Shimazu; Shoichiro Tsugane; Junjie Zhu; Gening Jiang; Ke Fei; Jae Yong Park; Yeul Hong Kim; Jae Sook Sung; Kyong Hwa Park; Young Tae Kim; Yoo Jin Jung; Chang Hyun Kang; In Kyu Park; Hee Nam Kim; Hyo Sung Jeon; Jin Eun Choi; Yi Young Choi; Jin Hee Kim; In Jae Oh; Young Chul Kim; Sook Whan Sung; Jun Suk Kim; Ho Il Yoon; Sun Seog Kweon; Min Ho Shin; Adeline Seow; Ying Chen; Wei Yen Lim; Jianjun Liu; Maria Pik Wong; Victor Ho Fun Lee; Bryan A. Bassig; Margaret Tucker; Sonja I. Berndt; Wong Ho Chow; Bu Tian Ji; Junwen Wang; Jun Xu; Alan Dart Loon Sihoe; James C.M. Ho; John K.C. Chan; Jiu Cun Wang; Daru Lu; Xueying Zhao; Zhenhong Zhao; Junjie Wu; Hongyan Chen; Li Jin; Fusheng Wei; Guoping Wu; She Juan An; Xu Chao Zhang; Jian Su; Yi Long Wu; Yu Tang Gao; Yong Bing Xiang; Xingzhou He; Jihua Li; Wei Zheng; Xiao Ou Shu; Qiuyin Cai; Robert Klein; William Pao; Charles Lawrence; H. Dean Hosgood; Chin Fu Hsiao; Li Hsin Chien; Ying Hsiang Chen; Chung Hsing Chen; Wen Chang Wang; Chih Yi Chen; Chih Liang Wang; Chong Jen Yu; Hui Ling Chen; Yu Chun Su; Fang Yu Tsai; Yi Song Chen; Yao Jen Li; Tsung Ying Yang; Chien Chung Lin; Pan Chyr Yang; Tangchun Wu; Dongxin Lin; Baosen Zhou; Jinming Yu; Hongbing Shen; Michiaki Kubo; Stephen J. Chanock; Nathaniel Rothman; Qing Lan

doi:10.1093/hmg/ddv494

Meta-analysis of genome-wide association studies identifies multiple lung cancer susceptibility loci in never-smoking Asian women

Zhaoming Wang, Wei Jie Seow, Kouya Shiraishi, Chao A. Hsiung, Keitaro Matsuo, Jie Liu, Kexin Chen, Taiki Yamji, Yang Yang, I. Shou Chang, Chen Wu, Yun Chul Hong, Laurie Burdett, Kathleen Wyatt, Charles C. Chung, Shengchao A. Li, Meredith Yeager, Amy Hutchinson, Wei Hu, Neil CaporasoMaria T. Landi, Nilanjan Chatterjee, Minsun Song, Joseph F. Fraumeni, Takashi Kohno, Jun Yokota, Hideo Kunitoh, Kyota Ashikawa, Yukihide Momozawa, Yataro Daigo, Tetsuya Mitsudomi, Yasushi Yatabe, Toyoaki Hida, Zhibin Hu, Juncheng Dai, Hongxia Ma, Guangfu Jin, Bao Song, Zhehai Wang, Sensen Cheng, Zhihua Yin, Xuelian Li, Yangwu Ren, Peng Guan, Jiang Chang, Wen Tan, Chien Jen Chen, Gee Chen Chang, Ying Huang Tsai, Wu Chou Su, Kuan Yu Chen, Ming Shyan Huang, Yuh Min Chen, Hong Zheng, Haixin Li, Ping Cui, Huan Guo, Ping Xu, Li Liu, Motoki Iwasaki, Taichi Shimazu, Shoichiro Tsugane, Junjie Zhu, Gening Jiang, Ke Fei, Jae Yong Park, Yeul Hong Kim, Jae Sook Sung, Kyong Hwa Park, Young Tae Kim, Yoo Jin Jung, Chang Hyun Kang, In Kyu Park, Hee Nam Kim, Hyo Sung Jeon, Jin Eun Choi, Yi Young Choi, Jin Hee Kim, In Jae Oh, Young Chul Kim, Sook Whan Sung, Jun Suk Kim, Ho Il Yoon, Sun Seog Kweon, Min Ho Shin, Adeline Seow, Ying Chen, Wei Yen Lim, Jianjun Liu, Maria Pik Wong, Victor Ho Fun Lee, Bryan A. Bassig, Margaret Tucker, Sonja I. Berndt, Wong Ho Chow, Bu Tian Ji, Junwen Wang, Jun Xu, Alan Dart Loon Sihoe, James C.M. Ho, John K.C. Chan, Jiu Cun Wang, Daru Lu, Xueying Zhao, Zhenhong Zhao, Junjie Wu, Hongyan Chen, Li Jin, Fusheng Wei, Guoping Wu, She Juan An, Xu Chao Zhang, Jian Su, Yi Long Wu, Yu Tang Gao, Yong Bing Xiang, Xingzhou He, Jihua Li, Wei Zheng, Xiao Ou Shu, Qiuyin Cai, Robert Klein, William Pao, Charles Lawrence, H. Dean Hosgood, Chin Fu Hsiao, Li Hsin Chien, Ying Hsiang Chen, Chung Hsing Chen, Wen Chang Wang, Chih Yi Chen, Chih Liang Wang, Chong Jen Yu, Hui Ling Chen, Yu Chun Su, Fang Yu Tsai, Yi Song Chen, Yao Jen Li, Tsung Ying Yang, Chien Chung Lin, Pan Chyr Yang, Tangchun Wu, Dongxin Lin, Baosen Zhou, Jinming Yu, Hongbing Shen, Michiaki Kubo, Stephen J. Chanock, Nathaniel Rothman, Qing Lan

Research output: Contribution to journal › Article › peer-review

33 Citations (Scopus)

Abstract

Genome-wide association studies (GWAS) of lung cancer in Asian never-smoking women have previously identified six susceptibility loci associated with lung cancer risk. To further discover new susceptibility loci, we imputed data from four GWAS of Asian non-smoking female lung cancer (6877 cases and 6277 controls) using the 1000 Genomes Project (Phase 1 Release 3) data as the reference and genotyped additional samples (5878 cases and 7046 controls) for possible replication. In our meta-analysis, three new loci achieved genome-wide significance, marked by single nucleotide polymorphism (SNP) rs7741164 at 6p21.1 (per-allele odds ratio (OR) = 1.17; P = 5.8 × 10^-13), rs72658409 at 9p21.3 (per-allele OR = 0.77; P = 1.41 × 10^-10) and rs11610143 at 12q13.13 (per-allele OR = 0.89; P = 4.96 × 10^-9). These findings identified new genetic susceptibility alleles for lung cancer in never-smoking women in Asia and merit follow-up to understand their biological underpinnings.

Original language	English
Pages (from-to)	620-629
Number of pages	10
Journal	Human Molecular Genetics
Volume	25
Issue number	3
DOIs	https://doi.org/10.1093/hmg/ddv494
Publication status	Published - 2016 Feb 1

ASJC Scopus subject areas

Molecular Biology
Genetics
Genetics(clinical)

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

Access to Document

10.1093/hmg/ddv494

Cite this

Wang, Z., Seow, W. J., Shiraishi, K., Hsiung, C. A., Matsuo, K., Liu, J., Chen, K., Yamji, T., Yang, Y., Chang, I. S., Wu, C., Hong, Y. C., Burdett, L., Wyatt, K., Chung, C. C., Li, S. A., Yeager, M., Hutchinson, A., Hu, W., ... Lan, Q. (2016). Meta-analysis of genome-wide association studies identifies multiple lung cancer susceptibility loci in never-smoking Asian women. Human Molecular Genetics, 25(3), 620-629. https://doi.org/10.1093/hmg/ddv494

Wang, Z, Seow, WJ, Shiraishi, K, Hsiung, CA, Matsuo, K, Liu, J, Chen, K, Yamji, T, Yang, Y, Chang, IS, Wu, C, Hong, YC, Burdett, L, Wyatt, K, Chung, CC, Li, SA, Yeager, M, Hutchinson, A, Hu, W, Caporaso, N, Landi, MT, Chatterjee, N, Song, M, Fraumeni, JF, Kohno, T, Yokota, J, Kunitoh, H, Ashikawa, K, Momozawa, Y, Daigo, Y, Mitsudomi, T, Yatabe, Y, Hida, T, Hu, Z, Dai, J, Ma, H, Jin, G, Song, B, Wang, Z, Cheng, S, Yin, Z, Li, X, Ren, Y, Guan, P, Chang, J, Tan, W, Chen, CJ, Chang, GC, Tsai, YH, Su, WC, Chen, KY, Huang, MS, Chen, YM, Zheng, H, Li, H, Cui, P, Guo, H, Xu, P, Liu, L, Iwasaki, M, Shimazu, T, Tsugane, S, Zhu, J, Jiang, G, Fei, K, Park, JY, Kim, YH, Sung, JS, Park, KH, Kim, YT, Jung, YJ, Kang, CH, Park, IK, Kim, HN, Jeon, HS, Choi, JE, Choi, YY, Kim, JH, Oh, IJ, Kim, YC, Sung, SW, Kim, JS, Yoon, HI, Kweon, SS, Shin, MH, Seow, A, Chen, Y, Lim, WY, Liu, J, Wong, MP, Lee, VHF, Bassig, BA, Tucker, M, Berndt, SI, Chow, WH, Ji, BT, Wang, J, Xu, J, Sihoe, ADL, Ho, JCM, Chan, JKC, Wang, JC, Lu, D, Zhao, X, Zhao, Z, Wu, J, Chen, H, Jin, L, Wei, F, Wu, G, An, SJ, Zhang, XC, Su, J, Wu, YL, Gao, YT, Xiang, YB, He, X, Li, J, Zheng, W, Shu, XO, Cai, Q, Klein, R, Pao, W, Lawrence, C, Hosgood, HD, Hsiao, CF, Chien, LH, Chen, YH, Chen, CH, Wang, WC, Chen, CY, Wang, CL, Yu, CJ, Chen, HL, Su, YC, Tsai, FY, Chen, YS, Li, YJ, Yang, TY, Lin, CC, Yang, PC, Wu, T, Lin, D, Zhou, B, Yu, J, Shen, H, Kubo, M, Chanock, SJ, Rothman, N & Lan, Q 2016, 'Meta-analysis of genome-wide association studies identifies multiple lung cancer susceptibility loci in never-smoking Asian women', Human Molecular Genetics, vol. 25, no. 3, pp. 620-629. https://doi.org/10.1093/hmg/ddv494

@article{2cc4369245854870b2782461b10ecc13,

title = "Meta-analysis of genome-wide association studies identifies multiple lung cancer susceptibility loci in never-smoking Asian women",

abstract = "Genome-wide association studies (GWAS) of lung cancer in Asian never-smoking women have previously identified six susceptibility loci associated with lung cancer risk. To further discover new susceptibility loci, we imputed data from four GWAS of Asian non-smoking female lung cancer (6877 cases and 6277 controls) using the 1000 Genomes Project (Phase 1 Release 3) data as the reference and genotyped additional samples (5878 cases and 7046 controls) for possible replication. In our meta-analysis, three new loci achieved genome-wide significance, marked by single nucleotide polymorphism (SNP) rs7741164 at 6p21.1 (per-allele odds ratio (OR) = 1.17; P = 5.8 × 10-13), rs72658409 at 9p21.3 (per-allele OR = 0.77; P = 1.41 × 10-10) and rs11610143 at 12q13.13 (per-allele OR = 0.89; P = 4.96 × 10-9). These findings identified new genetic susceptibility alleles for lung cancer in never-smoking women in Asia and merit follow-up to understand their biological underpinnings.",

author = "Zhaoming Wang and Seow, {Wei Jie} and Kouya Shiraishi and Hsiung, {Chao A.} and Keitaro Matsuo and Jie Liu and Kexin Chen and Taiki Yamji and Yang Yang and Chang, {I. Shou} and Chen Wu and Hong, {Yun Chul} and Laurie Burdett and Kathleen Wyatt and Chung, {Charles C.} and Li, {Shengchao A.} and Meredith Yeager and Amy Hutchinson and Wei Hu and Neil Caporaso and Landi, {Maria T.} and Nilanjan Chatterjee and Minsun Song and Fraumeni, {Joseph F.} and Takashi Kohno and Jun Yokota and Hideo Kunitoh and Kyota Ashikawa and Yukihide Momozawa and Yataro Daigo and Tetsuya Mitsudomi and Yasushi Yatabe and Toyoaki Hida and Zhibin Hu and Juncheng Dai and Hongxia Ma and Guangfu Jin and Bao Song and Zhehai Wang and Sensen Cheng and Zhihua Yin and Xuelian Li and Yangwu Ren and Peng Guan and Jiang Chang and Wen Tan and Chen, {Chien Jen} and Chang, {Gee Chen} and Tsai, {Ying Huang} and Su, {Wu Chou} and Chen, {Kuan Yu} and Huang, {Ming Shyan} and Chen, {Yuh Min} and Hong Zheng and Haixin Li and Ping Cui and Huan Guo and Ping Xu and Li Liu and Motoki Iwasaki and Taichi Shimazu and Shoichiro Tsugane and Junjie Zhu and Gening Jiang and Ke Fei and Park, {Jae Yong} and Kim, {Yeul Hong} and Sung, {Jae Sook} and Park, {Kyong Hwa} and Kim, {Young Tae} and Jung, {Yoo Jin} and Kang, {Chang Hyun} and Park, {In Kyu} and Kim, {Hee Nam} and Jeon, {Hyo Sung} and Choi, {Jin Eun} and Choi, {Yi Young} and Kim, {Jin Hee} and Oh, {In Jae} and Kim, {Young Chul} and Sung, {Sook Whan} and Kim, {Jun Suk} and Yoon, {Ho Il} and Kweon, {Sun Seog} and Shin, {Min Ho} and Adeline Seow and Ying Chen and Lim, {Wei Yen} and Jianjun Liu and Wong, {Maria Pik} and Lee, {Victor Ho Fun} and Bassig, {Bryan A.} and Margaret Tucker and Berndt, {Sonja I.} and Chow, {Wong Ho} and Ji, {Bu Tian} and Junwen Wang and Jun Xu and Sihoe, {Alan Dart Loon} and Ho, {James C.M.} and Chan, {John K.C.} and Wang, {Jiu Cun} and Daru Lu and Xueying Zhao and Zhenhong Zhao and Junjie Wu and Hongyan Chen and Li Jin and Fusheng Wei and Guoping Wu and An, {She Juan} and Zhang, {Xu Chao} and Jian Su and Wu, {Yi Long} and Gao, {Yu Tang} and Xiang, {Yong Bing} and Xingzhou He and Jihua Li and Wei Zheng and Shu, {Xiao Ou} and Qiuyin Cai and Robert Klein and William Pao and Charles Lawrence and Hosgood, {H. Dean} and Hsiao, {Chin Fu} and Chien, {Li Hsin} and Chen, {Ying Hsiang} and Chen, {Chung Hsing} and Wang, {Wen Chang} and Chen, {Chih Yi} and Wang, {Chih Liang} and Yu, {Chong Jen} and Chen, {Hui Ling} and Su, {Yu Chun} and Tsai, {Fang Yu} and Chen, {Yi Song} and Li, {Yao Jen} and Yang, {Tsung Ying} and Lin, {Chien Chung} and Yang, {Pan Chyr} and Tangchun Wu and Dongxin Lin and Baosen Zhou and Jinming Yu and Hongbing Shen and Michiaki Kubo and Chanock, {Stephen J.} and Nathaniel Rothman and Qing Lan",

note = "Funding Information: The Japan Lung Cancer Study (JLCS) was supported by a Grantin-Aid from the Japan Agency for Medical Research and Development (AMED) for the Health and Labor Sciences Research Expenses for Commission (the Practical Research for Innovative Cancer Control: H26-practical-general-094) and the Management Expenses Grants from the Government to the National Cancer Center (26-A-1) for Biobank. BioBank Japan was supported by the Ministry of Education, Culture, Sports, Sciences and Technology of the Japanese government. The Japan Public Health Center based prospective Study (the JPHC Study) was supported by National Cancer Center Research and Development Fund (23-A-31[toku] and 26-A-2) (since 2011) and a Grant-in-Aid for Cancer Research from the Ministry of Health, Labour and Welfare of Japan (from1989 to 2010). The Taiwan GELAC Study (Genetic Epidemiological Study for Lung AdenoCarcinoma) was supported by grants from the National Research Program on Genomic Medicine in Taiwan (DOH99-TD-G-111-028), the National Research Program for Biopharmaceuticals in Taiwan (MOHW 103-TDUPB-211-144003, MOST 103-2325-B-400-023) and Bioinformatics Core Facility for Translational Medicine and Biotechnology Development (MOST 104-2319-B-400-002). This work was also supported by the Jinan Science Research Project Foundation (201102051), Program for Changjiang Scholars and Innovative Research Team in University (PCSIRT) in China (IRT_14R40), the National Key Scientific and Technological Project (2011ZX09307-001-04), the National Natural Science Foundation of China (No. 81272293), the State Key Program of National Natural Science of China (81230067), the National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIP) (No. NRF-2014R1A2A2A05003665), Agency for Science, Technology and Research (A*STAR), Singapore and the US National Institute of Health Grant (1U19CA148127-01). The overall GWAS project was supported by the intramural program of the US National Institutes of Health/National Cancer Institute. Publisher Copyright: {\textcopyright} The Author 2015. Published by Oxford University Press. All rights reserved.",

year = "2016",

month = feb,

day = "1",

doi = "10.1093/hmg/ddv494",

language = "English",

volume = "25",

pages = "620--629",

journal = "Human Molecular Genetics",

issn = "0964-6906",

publisher = "Oxford University Press",

number = "3",

}

TY - JOUR

T1 - Meta-analysis of genome-wide association studies identifies multiple lung cancer susceptibility loci in never-smoking Asian women

AU - Wang, Zhaoming

AU - Seow, Wei Jie

AU - Shiraishi, Kouya

AU - Hsiung, Chao A.

AU - Matsuo, Keitaro

AU - Liu, Jie

AU - Chen, Kexin

AU - Yamji, Taiki

AU - Yang, Yang

AU - Chang, I. Shou

AU - Wu, Chen

AU - Hong, Yun Chul

AU - Burdett, Laurie

AU - Wyatt, Kathleen

AU - Chung, Charles C.

AU - Li, Shengchao A.

AU - Yeager, Meredith

AU - Hutchinson, Amy

AU - Hu, Wei

AU - Caporaso, Neil

AU - Landi, Maria T.

AU - Chatterjee, Nilanjan

AU - Song, Minsun

AU - Fraumeni, Joseph F.

AU - Kohno, Takashi

AU - Yokota, Jun

AU - Kunitoh, Hideo

AU - Ashikawa, Kyota

AU - Momozawa, Yukihide

AU - Daigo, Yataro

AU - Mitsudomi, Tetsuya

AU - Yatabe, Yasushi

AU - Hida, Toyoaki

AU - Hu, Zhibin

AU - Dai, Juncheng

AU - Ma, Hongxia

AU - Jin, Guangfu

AU - Song, Bao

AU - Wang, Zhehai

AU - Cheng, Sensen

AU - Yin, Zhihua

AU - Li, Xuelian

AU - Ren, Yangwu

AU - Guan, Peng

AU - Chang, Jiang

AU - Tan, Wen

AU - Chen, Chien Jen

AU - Chang, Gee Chen

AU - Tsai, Ying Huang

AU - Su, Wu Chou

AU - Chen, Kuan Yu

AU - Huang, Ming Shyan

AU - Chen, Yuh Min

AU - Zheng, Hong

AU - Li, Haixin

AU - Cui, Ping

AU - Guo, Huan

AU - Xu, Ping

AU - Liu, Li

AU - Iwasaki, Motoki

AU - Shimazu, Taichi

AU - Tsugane, Shoichiro

AU - Zhu, Junjie

AU - Jiang, Gening

AU - Fei, Ke

AU - Park, Jae Yong

AU - Kim, Yeul Hong

AU - Sung, Jae Sook

AU - Park, Kyong Hwa

AU - Kim, Young Tae

AU - Jung, Yoo Jin

AU - Kang, Chang Hyun

AU - Park, In Kyu

AU - Kim, Hee Nam

AU - Jeon, Hyo Sung

AU - Choi, Jin Eun

AU - Choi, Yi Young

AU - Kim, Jin Hee

AU - Oh, In Jae

AU - Kim, Young Chul

AU - Sung, Sook Whan

AU - Kim, Jun Suk

AU - Yoon, Ho Il

AU - Kweon, Sun Seog

AU - Shin, Min Ho

AU - Seow, Adeline

AU - Chen, Ying

AU - Lim, Wei Yen

AU - Liu, Jianjun

AU - Wong, Maria Pik

AU - Lee, Victor Ho Fun

AU - Bassig, Bryan A.

AU - Tucker, Margaret

AU - Berndt, Sonja I.

AU - Chow, Wong Ho

AU - Ji, Bu Tian

AU - Wang, Junwen

AU - Xu, Jun

AU - Sihoe, Alan Dart Loon

AU - Ho, James C.M.

AU - Chan, John K.C.

AU - Wang, Jiu Cun

AU - Lu, Daru

AU - Zhao, Xueying

AU - Zhao, Zhenhong

AU - Wu, Junjie

AU - Chen, Hongyan

AU - Jin, Li

AU - Wei, Fusheng

AU - Wu, Guoping

AU - An, She Juan

AU - Zhang, Xu Chao

AU - Su, Jian

AU - Wu, Yi Long

AU - Gao, Yu Tang

AU - Xiang, Yong Bing

AU - He, Xingzhou

AU - Li, Jihua

AU - Zheng, Wei

AU - Shu, Xiao Ou

AU - Cai, Qiuyin

AU - Klein, Robert

AU - Pao, William

AU - Lawrence, Charles

AU - Hosgood, H. Dean

AU - Hsiao, Chin Fu

AU - Chien, Li Hsin

AU - Chen, Ying Hsiang

AU - Chen, Chung Hsing

AU - Wang, Wen Chang

AU - Chen, Chih Yi

AU - Wang, Chih Liang

AU - Yu, Chong Jen

AU - Chen, Hui Ling

AU - Su, Yu Chun

AU - Tsai, Fang Yu

AU - Chen, Yi Song

AU - Li, Yao Jen

AU - Yang, Tsung Ying

AU - Lin, Chien Chung

AU - Yang, Pan Chyr

AU - Wu, Tangchun

AU - Lin, Dongxin

AU - Zhou, Baosen

AU - Yu, Jinming

AU - Shen, Hongbing

AU - Kubo, Michiaki

AU - Chanock, Stephen J.

AU - Rothman, Nathaniel

AU - Lan, Qing

N1 - Funding Information: The Japan Lung Cancer Study (JLCS) was supported by a Grantin-Aid from the Japan Agency for Medical Research and Development (AMED) for the Health and Labor Sciences Research Expenses for Commission (the Practical Research for Innovative Cancer Control: H26-practical-general-094) and the Management Expenses Grants from the Government to the National Cancer Center (26-A-1) for Biobank. BioBank Japan was supported by the Ministry of Education, Culture, Sports, Sciences and Technology of the Japanese government. The Japan Public Health Center based prospective Study (the JPHC Study) was supported by National Cancer Center Research and Development Fund (23-A-31[toku] and 26-A-2) (since 2011) and a Grant-in-Aid for Cancer Research from the Ministry of Health, Labour and Welfare of Japan (from1989 to 2010). The Taiwan GELAC Study (Genetic Epidemiological Study for Lung AdenoCarcinoma) was supported by grants from the National Research Program on Genomic Medicine in Taiwan (DOH99-TD-G-111-028), the National Research Program for Biopharmaceuticals in Taiwan (MOHW 103-TDUPB-211-144003, MOST 103-2325-B-400-023) and Bioinformatics Core Facility for Translational Medicine and Biotechnology Development (MOST 104-2319-B-400-002). This work was also supported by the Jinan Science Research Project Foundation (201102051), Program for Changjiang Scholars and Innovative Research Team in University (PCSIRT) in China (IRT_14R40), the National Key Scientific and Technological Project (2011ZX09307-001-04), the National Natural Science Foundation of China (No. 81272293), the State Key Program of National Natural Science of China (81230067), the National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIP) (No. NRF-2014R1A2A2A05003665), Agency for Science, Technology and Research (A*STAR), Singapore and the US National Institute of Health Grant (1U19CA148127-01). The overall GWAS project was supported by the intramural program of the US National Institutes of Health/National Cancer Institute. Publisher Copyright: © The Author 2015. Published by Oxford University Press. All rights reserved.

PY - 2016/2/1

Y1 - 2016/2/1

N2 - Genome-wide association studies (GWAS) of lung cancer in Asian never-smoking women have previously identified six susceptibility loci associated with lung cancer risk. To further discover new susceptibility loci, we imputed data from four GWAS of Asian non-smoking female lung cancer (6877 cases and 6277 controls) using the 1000 Genomes Project (Phase 1 Release 3) data as the reference and genotyped additional samples (5878 cases and 7046 controls) for possible replication. In our meta-analysis, three new loci achieved genome-wide significance, marked by single nucleotide polymorphism (SNP) rs7741164 at 6p21.1 (per-allele odds ratio (OR) = 1.17; P = 5.8 × 10-13), rs72658409 at 9p21.3 (per-allele OR = 0.77; P = 1.41 × 10-10) and rs11610143 at 12q13.13 (per-allele OR = 0.89; P = 4.96 × 10-9). These findings identified new genetic susceptibility alleles for lung cancer in never-smoking women in Asia and merit follow-up to understand their biological underpinnings.

AB - Genome-wide association studies (GWAS) of lung cancer in Asian never-smoking women have previously identified six susceptibility loci associated with lung cancer risk. To further discover new susceptibility loci, we imputed data from four GWAS of Asian non-smoking female lung cancer (6877 cases and 6277 controls) using the 1000 Genomes Project (Phase 1 Release 3) data as the reference and genotyped additional samples (5878 cases and 7046 controls) for possible replication. In our meta-analysis, three new loci achieved genome-wide significance, marked by single nucleotide polymorphism (SNP) rs7741164 at 6p21.1 (per-allele odds ratio (OR) = 1.17; P = 5.8 × 10-13), rs72658409 at 9p21.3 (per-allele OR = 0.77; P = 1.41 × 10-10) and rs11610143 at 12q13.13 (per-allele OR = 0.89; P = 4.96 × 10-9). These findings identified new genetic susceptibility alleles for lung cancer in never-smoking women in Asia and merit follow-up to understand their biological underpinnings.

UR - http://www.scopus.com/inward/record.url?scp=84960858474&partnerID=8YFLogxK

U2 - 10.1093/hmg/ddv494

DO - 10.1093/hmg/ddv494

M3 - Article

C2 - 26732429

AN - SCOPUS:84960858474

SN - 0964-6906

VL - 25

SP - 620

EP - 629

JO - Human Molecular Genetics

JF - Human Molecular Genetics

IS - 3

ER -

Meta-analysis of genome-wide association studies identifies multiple lung cancer susceptibility loci in never-smoking Asian women

Abstract

ASJC Scopus subject areas

UN SDGs

Access to Document

Other files and links

Fingerprint

Cite this