Nocardioides litoris sp. nov., isolated from the taean seashore

Dong Wan Lee, Aslan Hwanhwi Lee, Hanbyul Lee, Jae-Jin Kim, Jong Seong Khim, Un Hyuk Yim, Beom Seok Kim

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

A novel Gram-stain-positive, irregularly rod-shaped actinomycete, designated strain 002-2T, was isolated from sand beach sediment collected from the Taean seashore, Republic of Korea. Cells were aerobic, oxidase-negative and catalase-positive. Colonies of cells were bright yellow, circular, smooth and convex. The diagnostic diamino acid in the cell wall was LLdiaminopimelic acid. The predominant menaquinone was MK-8(H4). The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, an unknown phospholipid and two unknown amino phospholipids. The major fatty acids were iso-C16:0 and C17:1ѡ8c. The DNA G+C content was 68.8 mol%. 16S rRNA gene sequence analysis revealed that strain 002-2T belongs to the family Nocardioidaceae and formed a cluster with Nocardioides rubroscoriae Sco- A25T (98.1% sequence similarity) and Nocardioides plantarum NCIMB 12834T (97.6 %). On the basis of the phenotypic and phylogenetic data, strain 002-2T (=KCTC 39838T=DSM 103718T) is considered to represent a novel species of the genus Nocardioides, for which the name Nocardioides litoris sp. nov. is proposed.

Original languageEnglish
Pages (from-to)2332-2336
Number of pages5
JournalInternational Journal of Systematic and Evolutionary Microbiology
Volume67
Issue number7
DOIs
Publication statusPublished - 2017 Jul 1

Fingerprint

Nocardioides
phospholipid
Coastal zones
Phospholipids
Nocardioides plantarum
Vitamin K 2
Republic of Korea
Phosphatidylglycerols
Cardiolipins
Acids
Actinobacteria
new species
Nocardioidaceae
acid
Base Composition
phospholipids
rRNA Genes
Catalase
Cell Wall
Names

Keywords

  • Actinobacteria
  • Beach sediment
  • Nocardioides
  • Taean seashore

ASJC Scopus subject areas

  • Microbiology
  • Ecology, Evolution, Behavior and Systematics

Cite this

Nocardioides litoris sp. nov., isolated from the taean seashore. / Lee, Dong Wan; Lee, Aslan Hwanhwi; Lee, Hanbyul; Kim, Jae-Jin; Khim, Jong Seong; Yim, Un Hyuk; Kim, Beom Seok.

In: International Journal of Systematic and Evolutionary Microbiology, Vol. 67, No. 7, 01.07.2017, p. 2332-2336.

Research output: Contribution to journalArticle

Lee, Dong Wan ; Lee, Aslan Hwanhwi ; Lee, Hanbyul ; Kim, Jae-Jin ; Khim, Jong Seong ; Yim, Un Hyuk ; Kim, Beom Seok. / Nocardioides litoris sp. nov., isolated from the taean seashore. In: International Journal of Systematic and Evolutionary Microbiology. 2017 ; Vol. 67, No. 7. pp. 2332-2336.
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