TY - JOUR
T1 - Novosphingobium aureum sp. Nov., a marine bacterium isolated from salt flat sediment
AU - Yoo, Yeonjae
AU - Kim, Dongjun
AU - Lee, Hanbyul
AU - Khim, Jong Seong
AU - Kim, Bogun
AU - Yang, Dongmin
AU - Pathiraja, Duleepa
AU - Choi, Ingeol
AU - Kim, Jae Jin
N1 - Funding Information:
This research was funded by the Ministry of Oceans and Fisheries of Korea (MOF; 20170318 and 20170325) and a Korea University Grant.
Publisher Copyright:
© 2021 The Authors.
PY - 2021
Y1 - 2021
N2 - A Gram-stain-negative, aerobic, pale yellow-coloured, rod-shaped marine bacterium designated strain YJ-S2-02T was isolated from salt flat sediment sampled in Yongyu-do, Republic of Korea. Strain YJ-S2-02T grew at pH 6.0–9.0 (optimum, pH 7.0), 10–40 °C (optimum, 30 °C) and with optimum 1% (w/v) NaCl. The 16S rRNA gene sequence analysis indicated that strain YJ-S2-02T was closely related to Novosphingobium naphthalenivorans NBRC 102051T (97.8%) followed by Novosphingobium mathurense SM117T (97.5%), Novosphingobium indicum H25T (97.3%), Novosphingobium pentaromativorans US6-1T (96.8%), Novosphingobium fontis STM-14T (96.6%), Novosphingobium endophyticum EGI60015T (96.5%), Novosphingobium naphthae D39T (96.5%) and Novo-sphingobium malaysiense MUSC 273T (95.9%). The average nucleotide identity and estimated DNA–DNA hybridization values between YJ-S2-02T and related type strains were 77.0–77.9% and 19.1–24.0%. Strain YJ-S2-02T was characterized as having Q-10 as the predominant respiratory quinone and the principal fatty acids (>10%) were summed feature 8 (C18:1 ω6c/ω7c, 20.7%), C18:3 ω6c (16.3%) and C17:1 ω6c (11.8%). The polar lipids consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, sphingolipids and two unidentified lipids. The DNA G+C content of strain YJ-S2-02T was 65.6 mol%. On the basis of the polyphasic taxonomic evidence presented in this study, YJ-S2-02T should be classified as representing a novel species within the genus Novosphingobium, for which name Novosphingobium aureum is proposed, with the type strain YJ-S2-02T (=KACC 21677T =KCTC 72891T=JCM 33996T).
AB - A Gram-stain-negative, aerobic, pale yellow-coloured, rod-shaped marine bacterium designated strain YJ-S2-02T was isolated from salt flat sediment sampled in Yongyu-do, Republic of Korea. Strain YJ-S2-02T grew at pH 6.0–9.0 (optimum, pH 7.0), 10–40 °C (optimum, 30 °C) and with optimum 1% (w/v) NaCl. The 16S rRNA gene sequence analysis indicated that strain YJ-S2-02T was closely related to Novosphingobium naphthalenivorans NBRC 102051T (97.8%) followed by Novosphingobium mathurense SM117T (97.5%), Novosphingobium indicum H25T (97.3%), Novosphingobium pentaromativorans US6-1T (96.8%), Novosphingobium fontis STM-14T (96.6%), Novosphingobium endophyticum EGI60015T (96.5%), Novosphingobium naphthae D39T (96.5%) and Novo-sphingobium malaysiense MUSC 273T (95.9%). The average nucleotide identity and estimated DNA–DNA hybridization values between YJ-S2-02T and related type strains were 77.0–77.9% and 19.1–24.0%. Strain YJ-S2-02T was characterized as having Q-10 as the predominant respiratory quinone and the principal fatty acids (>10%) were summed feature 8 (C18:1 ω6c/ω7c, 20.7%), C18:3 ω6c (16.3%) and C17:1 ω6c (11.8%). The polar lipids consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, sphingolipids and two unidentified lipids. The DNA G+C content of strain YJ-S2-02T was 65.6 mol%. On the basis of the polyphasic taxonomic evidence presented in this study, YJ-S2-02T should be classified as representing a novel species within the genus Novosphingobium, for which name Novosphingobium aureum is proposed, with the type strain YJ-S2-02T (=KACC 21677T =KCTC 72891T=JCM 33996T).
KW - Marine bacteria
KW - Novosphingobium
KW - Salt flat
KW - Sphingomonadaceae
UR - http://www.scopus.com/inward/record.url?scp=85111422289&partnerID=8YFLogxK
U2 - 10.1099/ijsem.0.004930
DO - 10.1099/ijsem.0.004930
M3 - Article
C2 - 34328829
AN - SCOPUS:85111422289
SN - 1466-5026
VL - 71
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 7
M1 - 004930
ER -