Polymeric LabChip Real-Time PCR as a Point-of-Care-Potential Diagnostic Tool for Rapid Detection of Influenza A/H1N1 Virus in Human Clinical Specimens

Hyun Ok Song, Je Hyoung Kim, Ho Sun Ryu, Dong Hoon Lee, Sun Jin Kim, Deog Joong Kim, In Bum Suh, Du Young Choi, Kwang Ho In, Sung Woo Kim, Hyun Park

Research output: Contribution to journalArticle

22 Citations (Scopus)

Abstract

It is clinically important to be able to detect influenza A/H1N1 virus using a fast, portable, and accurate system that has high specificity and sensitivity. To achieve this goal, it is necessary to develop a highly specific primer set that recognizes only influenza A viral genes and a rapid real-time PCR system that can detect even a single copy of the viral gene. In this study, we developed and validated a novel fluidic chip-type real-time PCR (LabChip real-time PCR) system that is sensitive and specific for the detection of influenza A/H1N1, including the pandemic influenza strain A/H1N1 of 2009. This LabChip real-time PCR system has several remarkable features: (1) It allows rapid quantitative analysis, requiring only 15 min to perform 30 cycles of real-time PCR. (2) It is portable, with a weight of only 5.5 kg. (3) The reaction cost is low, since it uses disposable plastic chips. (4) Its high efficiency is equivalent to that of commercially available tube-type real-time PCR systems. The developed disposable LabChip is an economic, heat-transferable, light-transparent, and easy-to-fabricate polymeric chip compared to conventional silicon- or glass-based labchip. In addition, our LabChip has large surface-to-volume ratios in micro channels that are required for overcoming time consumed for temperature control during real-time PCR. The efficiency of the LabChip real-time PCR system was confirmed using novel primer sets specifically targeted to the hemagglutinin (HA) gene of influenza A/H1N1 and clinical specimens. Eighty-five human clinical swab samples were tested using the LabChip real-time PCR. The results demonstrated 100% sensitivity and specificity, showing 72 positive and 13 negative cases. These results were identical to those from a tube-type real-time PCR system. This indicates that the novel LabChip real-time PCR may be an ultra-fast, quantitative, point-of-care-potential diagnostic tool for influenza A/H1N1 with a high sensitivity and specificity.

Original languageEnglish
Article numbere53325
JournalPLoS One
Volume7
Issue number12
DOIs
Publication statusPublished - 2012 Dec 28

Fingerprint

Point-of-Care Systems
H1N1 Subtype Influenza A Virus
Influenza A virus
Real time systems
Viruses
influenza
Real-Time Polymerase Chain Reaction
quantitative polymerase chain reaction
Computer Systems
Human Influenza
Genes
Viral Genes
Hemagglutinins
Fluidics
Silicon
Sensitivity and Specificity
Temperature control
Plastics
genes
Glass

ASJC Scopus subject areas

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)

Cite this

Polymeric LabChip Real-Time PCR as a Point-of-Care-Potential Diagnostic Tool for Rapid Detection of Influenza A/H1N1 Virus in Human Clinical Specimens. / Song, Hyun Ok; Kim, Je Hyoung; Ryu, Ho Sun; Lee, Dong Hoon; Kim, Sun Jin; Kim, Deog Joong; Suh, In Bum; Choi, Du Young; In, Kwang Ho; Kim, Sung Woo; Park, Hyun.

In: PLoS One, Vol. 7, No. 12, e53325, 28.12.2012.

Research output: Contribution to journalArticle

Song, Hyun Ok ; Kim, Je Hyoung ; Ryu, Ho Sun ; Lee, Dong Hoon ; Kim, Sun Jin ; Kim, Deog Joong ; Suh, In Bum ; Choi, Du Young ; In, Kwang Ho ; Kim, Sung Woo ; Park, Hyun. / Polymeric LabChip Real-Time PCR as a Point-of-Care-Potential Diagnostic Tool for Rapid Detection of Influenza A/H1N1 Virus in Human Clinical Specimens. In: PLoS One. 2012 ; Vol. 7, No. 12.
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