Pragmatic image reconstruction for the MiCES fully-3D mouse imaging PET scanner

Kisung Lee, Paul E. Kinahan, Jeffrey A. Fessler, Robert S. Miyaoka, Tom K. Lewellen

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Citations (Scopus)

Abstract

We present a pragmatic approach to image reconstruction for data from the MiCES fully-3D mouse imaging PET scanner under construction at the University of Washington. Our approach is modeled on fully-3D image reconstruction used in clinical PET scanners, which is based on Fourier rebinning (FORE) followed by 2D iterative image reconstruction. The use of iterative methods allows modeling the effects of statistical noise and attenuation etc., while FORE accelerates the reconstruction process by reducing the fully-3D data to a stacked set of independent 2D sinograms. Preliminary investigations have indicated that non-stationary detector point-spread response effects, which are ignored for clinical imaging, significantly impact image quality for the MiCES scanner geometry. To model the effect of non-stationary detector point spread response, we have added a factorized system matrix to the ASPIRE reconstruction library. The current implementation uses FORE+AWOSEM followed by post-reconstruction 3D Gaussian smoothing. The results indicate that the proposed approach produces a dramatic improvement in resolution without undue increases in noise.

Original languageEnglish
Title of host publicationIEEE Nuclear Science Symposium Conference Record
EditorsS.D. Metzler
Pages2566-2570
Number of pages5
Volume4
Publication statusPublished - 2003
Event2003 IEEE Nuclear Science Symposium Conference Record - Nuclear Science Symposium, Medical Imaging Conference - Portland, OR, United States
Duration: 2003 Oct 192003 Oct 25

Other

Other2003 IEEE Nuclear Science Symposium Conference Record - Nuclear Science Symposium, Medical Imaging Conference
CountryUnited States
CityPortland, OR
Period03/10/1903/10/25

Fingerprint

Image reconstruction
Imaging techniques
Detectors
Medical imaging
Iterative methods
Image quality
Geometry

ASJC Scopus subject areas

  • Computer Vision and Pattern Recognition
  • Industrial and Manufacturing Engineering

Cite this

Lee, K., Kinahan, P. E., Fessler, J. A., Miyaoka, R. S., & Lewellen, T. K. (2003). Pragmatic image reconstruction for the MiCES fully-3D mouse imaging PET scanner. In S. D. Metzler (Ed.), IEEE Nuclear Science Symposium Conference Record (Vol. 4, pp. 2566-2570). [M10-196]

Pragmatic image reconstruction for the MiCES fully-3D mouse imaging PET scanner. / Lee, Kisung; Kinahan, Paul E.; Fessler, Jeffrey A.; Miyaoka, Robert S.; Lewellen, Tom K.

IEEE Nuclear Science Symposium Conference Record. ed. / S.D. Metzler. Vol. 4 2003. p. 2566-2570 M10-196.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Lee, K, Kinahan, PE, Fessler, JA, Miyaoka, RS & Lewellen, TK 2003, Pragmatic image reconstruction for the MiCES fully-3D mouse imaging PET scanner. in SD Metzler (ed.), IEEE Nuclear Science Symposium Conference Record. vol. 4, M10-196, pp. 2566-2570, 2003 IEEE Nuclear Science Symposium Conference Record - Nuclear Science Symposium, Medical Imaging Conference, Portland, OR, United States, 03/10/19.
Lee K, Kinahan PE, Fessler JA, Miyaoka RS, Lewellen TK. Pragmatic image reconstruction for the MiCES fully-3D mouse imaging PET scanner. In Metzler SD, editor, IEEE Nuclear Science Symposium Conference Record. Vol. 4. 2003. p. 2566-2570. M10-196
Lee, Kisung ; Kinahan, Paul E. ; Fessler, Jeffrey A. ; Miyaoka, Robert S. ; Lewellen, Tom K. / Pragmatic image reconstruction for the MiCES fully-3D mouse imaging PET scanner. IEEE Nuclear Science Symposium Conference Record. editor / S.D. Metzler. Vol. 4 2003. pp. 2566-2570
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