Probabilistic source separation on resting-state fMRI and its use for early MCI identification

Eunsong Kang, Heung-Il Suk

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

In analyzing rs-fMRI, blind source separation has been studied extensively and various machine-learning techniques have been proposed in the literature. However, to our best knowledge, most of the existing methods do not explicitly separate noise components that naturally corrupt the observed BOLD signals, thus hindering from the understanding of underlying functional mechanisms in a human brain. In this paper, we formulate the problem of latent source separation in a probabilistic manner, where we explicitly separate the observed signals into a true source signal and a noise component. As for the inference of the latent source distribution with respect to an input regional mean signal, we use a stochastic variational Bayesian inference and implement it in a neural network framework. Further, in order for identification of a subject with early mild cognitive impairment (eMCI) rs-fMRI, we also propose to use the relations of the inferred source signals as features, i.e., potential imaging-biomarkers. We presented the validity of the proposed methods by conducting experiments on the publicly available ADNI2 dataset and comparing with the existing methods.

Original languageEnglish
Title of host publicationMedical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings
EditorsAlejandro F. Frangi, Christos Davatzikos, Gabor Fichtinger, Carlos Alberola-López, Julia A. Schnabel
PublisherSpringer Verlag
Pages275-283
Number of pages9
ISBN (Print)9783030009304
DOIs
Publication statusPublished - 2018 Jan 1
Event21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018 - Granada, Spain
Duration: 2018 Sep 162018 Sep 20

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume11072 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Other

Other21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018
CountrySpain
CityGranada
Period18/9/1618/9/20

Fingerprint

Source separation
Source Separation
Functional Magnetic Resonance Imaging
Blind source separation
Biomarkers
Learning systems
Brain
Neural networks
Imaging techniques
Blind Source Separation
Bayesian inference
Experiments
Machine Learning
Imaging
Magnetic Resonance Imaging
Neural Networks
Experiment

ASJC Scopus subject areas

  • Theoretical Computer Science
  • Computer Science(all)

Cite this

Kang, E., & Suk, H-I. (2018). Probabilistic source separation on resting-state fMRI and its use for early MCI identification. In A. F. Frangi, C. Davatzikos, G. Fichtinger, C. Alberola-López, & J. A. Schnabel (Eds.), Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings (pp. 275-283). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 11072 LNCS). Springer Verlag. https://doi.org/10.1007/978-3-030-00931-1_32

Probabilistic source separation on resting-state fMRI and its use for early MCI identification. / Kang, Eunsong; Suk, Heung-Il.

Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. ed. / Alejandro F. Frangi; Christos Davatzikos; Gabor Fichtinger; Carlos Alberola-López; Julia A. Schnabel. Springer Verlag, 2018. p. 275-283 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 11072 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Kang, E & Suk, H-I 2018, Probabilistic source separation on resting-state fMRI and its use for early MCI identification. in AF Frangi, C Davatzikos, G Fichtinger, C Alberola-López & JA Schnabel (eds), Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 11072 LNCS, Springer Verlag, pp. 275-283, 21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018, Granada, Spain, 18/9/16. https://doi.org/10.1007/978-3-030-00931-1_32
Kang E, Suk H-I. Probabilistic source separation on resting-state fMRI and its use for early MCI identification. In Frangi AF, Davatzikos C, Fichtinger G, Alberola-López C, Schnabel JA, editors, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Springer Verlag. 2018. p. 275-283. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). https://doi.org/10.1007/978-3-030-00931-1_32
Kang, Eunsong ; Suk, Heung-Il. / Probabilistic source separation on resting-state fMRI and its use for early MCI identification. Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. editor / Alejandro F. Frangi ; Christos Davatzikos ; Gabor Fichtinger ; Carlos Alberola-López ; Julia A. Schnabel. Springer Verlag, 2018. pp. 275-283 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
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