Abstract
Bacteriophage Sha1, a newly isolated temperate phage from a mitomycin-C-induced lysate of Lactobacillus plantarum isolated from Kimchi, has an isometric head (58 nm × 60 nm) and a long tail (259 nm × 11 nm). The double-strand DNA genome of the phage Sha1 was 41,726 base pairs (bp) long, with a G+C content of 40. 61%. Bioinformatic analysis of Sha1 shows that this phage contains 58 putative open reading frames (ORFs). Sha1 can be classified as a member of the large family Siphoviridae by genomic structure and morphology. To our knowledge, this is the first report of genomic sequencing and characterization of temperate phage Sha1 from wild-type L. plantarum isolated from kimchi in Korea.
| Original language | English |
|---|---|
| Pages (from-to) | 1681-1684 |
| Number of pages | 4 |
| Journal | Archives of Virology |
| Volume | 156 |
| Issue number | 9 |
| DOIs | |
| Publication status | Published - 2011 Sep 1 |
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ASJC Scopus subject areas
- Virology
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Sequence analysis of the Lactobacillus temperate phage Sha1. / Yoon, Bo Hyun; Jang, Se Hwan; Chang, Hyo-Ihl.
In: Archives of Virology, Vol. 156, No. 9, 01.09.2011, p. 1681-1684.Research output: Contribution to journal › Article
}
TY - JOUR
T1 - Sequence analysis of the Lactobacillus temperate phage Sha1
AU - Yoon, Bo Hyun
AU - Jang, Se Hwan
AU - Chang, Hyo-Ihl
PY - 2011/9/1
Y1 - 2011/9/1
N2 - Bacteriophage Sha1, a newly isolated temperate phage from a mitomycin-C-induced lysate of Lactobacillus plantarum isolated from Kimchi, has an isometric head (58 nm × 60 nm) and a long tail (259 nm × 11 nm). The double-strand DNA genome of the phage Sha1 was 41,726 base pairs (bp) long, with a G+C content of 40. 61%. Bioinformatic analysis of Sha1 shows that this phage contains 58 putative open reading frames (ORFs). Sha1 can be classified as a member of the large family Siphoviridae by genomic structure and morphology. To our knowledge, this is the first report of genomic sequencing and characterization of temperate phage Sha1 from wild-type L. plantarum isolated from kimchi in Korea.
AB - Bacteriophage Sha1, a newly isolated temperate phage from a mitomycin-C-induced lysate of Lactobacillus plantarum isolated from Kimchi, has an isometric head (58 nm × 60 nm) and a long tail (259 nm × 11 nm). The double-strand DNA genome of the phage Sha1 was 41,726 base pairs (bp) long, with a G+C content of 40. 61%. Bioinformatic analysis of Sha1 shows that this phage contains 58 putative open reading frames (ORFs). Sha1 can be classified as a member of the large family Siphoviridae by genomic structure and morphology. To our knowledge, this is the first report of genomic sequencing and characterization of temperate phage Sha1 from wild-type L. plantarum isolated from kimchi in Korea.
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UR - http://www.scopus.com/inward/citedby.url?scp=80052272946&partnerID=8YFLogxK
U2 - 10.1007/s00705-011-1048-2
DO - 10.1007/s00705-011-1048-2
M3 - Article
VL - 156
SP - 1681
EP - 1684
JO - The BMJ
JF - The BMJ
SN - 0730-6512
IS - 9
ER -