The complete plastome sequences of Mangifera indica L. (Anacardiaceae)

Sangjin Jo, Hoe Won Kim, Young Kee Kim, Jung Yeon Sohn, Se Hwan Cheon, Ki-Joong Kim

Research output: Contribution to journalArticle

Abstract

In this study, we determined the complete plastome sequence of Mangifera indica L. (Anacardiaceae) (NCBI acc. no. KX871231). The complete plastome is 157,780 bp in length, and consists of a large single copy of 86,673 bp and a small single copy of 18,349 bp, separated by two inverted repeats of 25,792 bp. The plastome contains 112 genes, of which 78 are protein-coding genes, 30 are tRNA genes, and four are rRNA genes. Sixteen genes contain one intron and two genes have two introns. The average A-T content of the plastome is 62.1%. The M. indica plastome has approximately 15 kb inversion between trnT-UGU and trnT-GGU. We identify a palindromic repeat of 18 bp (ATTCTTTTTTTTTTTTTT/AAAAAAAAAAAAAAGAAT) near the inversion breakpoints of M. indica plastome. Phylogenetic analysis revealed that M. indica is a sister group of Rhus chinensis with 100% bootstrap support. Anacardiaceae clade is a sister group of Boswellia sacra (Burseraceae) with 100% bootstrap support.

Original languageEnglish
Pages (from-to)698-700
Number of pages3
JournalMitochondrial DNA Part B: Resources
Volume2
Issue number2
DOIs
Publication statusPublished - 2017 Dec 20

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Anacardiaceae
Mangifera
Introns
Genes
Burseraceae
Boswellia
Rhus
Transfer RNA
rRNA Genes
Proteins

Keywords

  • Anacardiaceae
  • large inversion
  • Mangifera indica
  • mango
  • Plastome

ASJC Scopus subject areas

  • Genetics
  • Molecular Biology

Cite this

The complete plastome sequences of Mangifera indica L. (Anacardiaceae). / Jo, Sangjin; Kim, Hoe Won; Kim, Young Kee; Sohn, Jung Yeon; Cheon, Se Hwan; Kim, Ki-Joong.

In: Mitochondrial DNA Part B: Resources, Vol. 2, No. 2, 20.12.2017, p. 698-700.

Research output: Contribution to journalArticle

Jo, Sangjin ; Kim, Hoe Won ; Kim, Young Kee ; Sohn, Jung Yeon ; Cheon, Se Hwan ; Kim, Ki-Joong. / The complete plastome sequences of Mangifera indica L. (Anacardiaceae). In: Mitochondrial DNA Part B: Resources. 2017 ; Vol. 2, No. 2. pp. 698-700.
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