Topography-based registration of developing cortical surfaces in infants using multidirectional varifold representation

Islem Rekik, Gang Li, Weili Lin, Dinggang Shen

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Abstract

Cortical surface registration or matching facilitates atlasing, cortical morphology-function comparison and statistical analysis. Methods that geodesically shoot surfaces into one another, as currents or varifolds, provide an elegant mathematical framework for generic surface matching and dynamic local features estimation, such as deformation momenta. However, conventional current and varifold matching methods only use the normals of the surface to measure its geometry and guide the warping process, which overlooks the importance of the direction in the convoluted cortical sulcal and gyral folds. To cope with the stated limitation, we decompose each cortical surface into its normal and tangent varifold representations, by integrating principal curvature direction field into the varifold matching framework, thus providing rich information for the direction of cortical folding and better characterization of the cortical geometry. To include more informative cortical geometric features in the matching process, we adaptively place control points based on the surface topography, hence the deformation is controlled by points lying on gyral crests (or “hills”) and sulcal fundi (or “valleys”) of the cortical surface, which are the most reliable and important topographic and anatomical landmarks on the cortex. We applied our method for registering the developing cortical surfaces in 12 infants from 0 to 6 months of age. Both of these variants significantly improved the matching accuracy in terms of closeness to the target surface and the precision of alignment with regional anatomical boundaries, when compared with several state-of-the- art methods: (1) diffeomorphic spectral matching, (2) current-based surface matching and (3) original varifold-based surface matching.

Original languageEnglish
Title of host publicationLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
PublisherSpringer Verlag
Pages230-237
Number of pages8
Volume9350
ISBN (Print)9783319245706, 9783319245706, 9783319245706
DOIs
Publication statusPublished - 2015
Externally publishedYes
Event18th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2015 - Munich, Germany
Duration: 2015 Oct 52015 Oct 9

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume9350
ISSN (Print)03029743
ISSN (Electronic)16113349

Other

Other18th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2015
CountryGermany
CityMunich
Period15/10/515/10/9

Fingerprint

Topography
Registration
Surface Topography
Principal curvature
Geometry
Warping
Local Features
Control Points
Surface topography
Cortex
Landmarks
Folding
Tangent line
Statistical Analysis
Statistical methods
Momentum
Alignment
Fold
Decompose
Target

ASJC Scopus subject areas

  • Computer Science(all)
  • Theoretical Computer Science

Cite this

Rekik, I., Li, G., Lin, W., & Shen, D. (2015). Topography-based registration of developing cortical surfaces in infants using multidirectional varifold representation. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) (Vol. 9350, pp. 230-237). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 9350). Springer Verlag. https://doi.org/10.1007/978-3-319-24571-3_28

Topography-based registration of developing cortical surfaces in infants using multidirectional varifold representation. / Rekik, Islem; Li, Gang; Lin, Weili; Shen, Dinggang.

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 9350 Springer Verlag, 2015. p. 230-237 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 9350).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rekik, I, Li, G, Lin, W & Shen, D 2015, Topography-based registration of developing cortical surfaces in infants using multidirectional varifold representation. in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). vol. 9350, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 9350, Springer Verlag, pp. 230-237, 18th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2015, Munich, Germany, 15/10/5. https://doi.org/10.1007/978-3-319-24571-3_28
Rekik I, Li G, Lin W, Shen D. Topography-based registration of developing cortical surfaces in infants using multidirectional varifold representation. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 9350. Springer Verlag. 2015. p. 230-237. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). https://doi.org/10.1007/978-3-319-24571-3_28
Rekik, Islem ; Li, Gang ; Lin, Weili ; Shen, Dinggang. / Topography-based registration of developing cortical surfaces in infants using multidirectional varifold representation. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 9350 Springer Verlag, 2015. pp. 230-237 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).
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